Evidence map›Paper›PMID 26908829›Full record

ArticleJournal of lipid research2016

The effects of apolipoprotein B depletion on HDL subspecies composition and function.

W Sean Davidson, Anna Heink, Hannah Sexmith, John T Melchior, Scott M Gordon, Zsuzsanna Kuklenyik, Laura Woollett, John R Barr, Jeffrey I Jones, Christopher A Toth and 1 more

Erratum issuedAbstract read
In one paragraph

Article in Journal of lipid research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 39 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Alcohol Consumption and Cardiovascular Health.The American journal of medicine · 2022
    Pooled it
  3. Trial
  4. Trial
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. HDL Function across the Lifespan: From Childhood, to Pregnancy, to Old Age.International journal of molecular sciences · 2023
    Review
  13. Article
  14. Article
  15. High Free Cholesterol Bioavailability Drives the Tissue Pathologies in Scarb1Arteriosclerosis, thrombosis, and vascular biology · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

W Sean DavidsonCenter for Lipid and Arteriosclerosis Science, Department of Pathology and Laboratory Medicine, University of Cincinnati, Cincinnati, OH 45237.
Anna HeinkDepartment of Pediatrics, Cincinnati Children's Hospital Research Foundation, Cincinnati, OH 45229.
Hannah SexmithDepartment of Pediatrics, Cincinnati Children's Hospital Research Foundation, Cincinnati, OH 45229.
John T MelchiorCenter for Lipid and Arteriosclerosis Science, Department of Pathology and Laboratory Medicine, University of Cincinnati, Cincinnati, OH 45237.
Scott M GordonNational Heart, Lung, and Blood Institute, Lipoprotein Metabolism Section,, Bethesda, MD 20892.
Zsuzsanna KuklenyikDivision of Laboratory Sciences, National Center for Environmental Health, Centers for Disease Control and Prevention, Atlanta, GA 30341.
Laura WoollettCenter for Lipid and Arteriosclerosis Science, Department of Pathology and Laboratory Medicine, University of Cincinnati, Cincinnati, OH 45237.
John R BarrDivision of Laboratory Sciences, National Center for Environmental Health, Centers for Disease Control and Prevention, Atlanta, GA 30341.
Jeffrey I JonesDivision of Laboratory Sciences, National Center for Environmental Health, Centers for Disease Control and Prevention, Atlanta, GA 30341.
Christopher A TothBattelle Memorial Institute, Analytical Services, Atlanta, GA 30329.
Amy S ShahDepartment of Pediatrics, Cincinnati Children's Hospital Research Foundation, Cincinnati, OH 45229 amy.shah@cchmc.org.

Funding

LCenter for Clinical and Translational Science and TrainingUL1TR001425 · NCATS · UNIVERSITY OF CINCINNATI · PI HEUBI, JAMES E., KISSELA, BRETT M · 2015 to 2024
$37.5M
Apolipoprotein A-I structure in high density lipoproteinsR01HL067093 · NHLBI · UNIVERSITY OF CINCINNATI · PI DAVIDSON, W SEAN · 2002 to 2016
$4.3M
Understanding the Role of HDL Subspecies in Adolescents with Type 2 DiabetesK23HL118132 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI SHAH, AMY SANGHAVI · 2014 to 2018
$855k
The molecular basis for high density lipoprotein heterogeneityR21HL104136 · NHLBI · UNIVERSITY OF CINCINNATI · PI DAVIDSON, W SEAN · 2010 to 2011
$440k
NCATS NIH HHS UL1 TR001425NHLBI NIH HHS K23 HL118132NHLBI NIH HHS K23HL118132NHLBI NIH HHS R01 HL067093NHLBI NIH HHS R01HL104136NHLBI NIH HHS R01HL67093NHLBI NIH HHS R21 HL104136
6 · The paper itself

Abstract

HDL cholesterol (HDL-C) efflux function may be a more robust biomarker of coronary artery disease risk than HDL-C. To study HDL function, apoB-containing lipoproteins are precipitated from serum. Whether apoB precipitation affects HDL subspecies composition and function has not been thoroughly investigated. We studied the effects of four common apoB precipitation methods [polyethylene glycol (PEG), dextran sulfate/magnesium chloride (MgCl2), heparin sodium/manganese chloride (MnCl2), and LipoSep immunoprecipitation (IP)] on HDL subspecies composition, apolipoproteins, and function (cholesterol efflux and reduction of LDL oxidation). PEG dramatically shifted the size distribution of HDL and apolipoproteins (assessed by two independent methods), while leaving substantial amounts of reagent in the sample. PEG also changed the distribution of cholesterol efflux and LDL oxidation across size fractions, but not overall efflux across the HDL range. Dextran sulfate/MgCl2, heparin sodium/MnCl2, and LipoSep IP did not change the size distribution of HDL subspecies, but altered the quantity of a subset of apolipoproteins. Thus, each of the apoB precipitation methods affected HDL composition and/or size distribution. We conclude that careful evaluation is needed when selecting apoB depletion methods for existing and future bioassays of HDL function.

Indexed as

Chemical PrecipitationAdultApolipoprotein A-IApolipoproteins BBiological TransportChloridesCholesterol, HDLDextran SulfateFemaleHeparinHumansLipoproteins, LDLManganese CompoundsOxidation-ReductionParticle SizePolyethylene GlycolsApolipoprotein A-IApolipoproteins BChloridesCholesterol, HDLDextran SulfateHeparinLipoproteins, LDLmanganese chlorideManganese CompoundsPolyethylene Glycolscholesterol effluxdextran sulfateheparin sodiumhigh density lipoproteinlipoproteinslow density lipoproteinpolyethylene glycolproteomics

Identifiers

PMID26908829
PMCPMC4808776

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.