Evidence map›Paper›PMID 26908622›Full record

ArticleHuman molecular genetics2016

A secreted WNT-ligand-binding domain of FZD5 generated by a frameshift mutation causes autosomal dominant coloboma.

Chunqiao Liu, Sonya A Widen, Kathleen A Williamson, Rinki Ratnapriya, Christina Gerth-Kahlert, Joe Rainger, Ramakrishna P Alur, Erin Strachan, Souparnika H Manjunath, Archana Balakrishnan and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Case report: A novel intronicFrontiers in genetics · 2025
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  7. Observational
  8. Article
  9. Article
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  11. The transcription factorDisease models & mechanisms · 2020
    Article
  12. Review
  13. Article
  14. Sostdc1 is expressed in all major compartments of developing and adult mammalian eyes.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2019
    Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. The Transcription Factor Foxg1 Promotes Optic Fissure Closure in the Mouse by Suppressing Wnt8b in the Nasal Optic Stalk.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 5 countries.

Chunqiao LiuNeurobiology-Neurodegeneration and Repair Laboratory, National Eye Institute, National Institutes of Health, 6 Center Drive, Bethesda, MD 20892, USA, State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, Guangzhou 510060, China.
Sonya A WidenDepartment of Biological Sciences, University of Alberta, Edmonton, AB, Canada T6G 2E9.
Kathleen A WilliamsonMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh EH4 2XU, UK.
Rinki RatnapriyaNeurobiology-Neurodegeneration and Repair Laboratory, National Eye Institute, National Institutes of Health, 6 Center Drive, Bethesda, MD 20892, USA.
Christina Gerth-KahlertDepartment of Ophthalmology, University Hospital Zurich, Frauenklinikstrasse 24, Zurich 8091, Switzerland.
Joe RaingerMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh EH4 2XU, UK.
Ramakrishna P AlurUnit on Pediatric, Developmental, and Genetic Eye Disease, National Eye Institute, 10 Center Drive, Bethesda, MD 20892, USA.
Erin StrachanDepartment of Ophthalmology and Visual Sciences, University of Alberta, Edmonton, AB, Canada T6G 2H7.
Souparnika H ManjunathNeurobiology-Neurodegeneration and Repair Laboratory, National Eye Institute, National Institutes of Health, 6 Center Drive, Bethesda, MD 20892, USA.
Archana BalakrishnanNeurobiology-Neurodegeneration and Repair Laboratory, National Eye Institute, National Institutes of Health, 6 Center Drive, Bethesda, MD 20892, USA.
James A FloydWelcome Trust Sanger Institute, Hinxton, Cambridge CB10 1HH, UK and.
UK10K Consortium
Tiansen LiNeurobiology-Neurodegeneration and Repair Laboratory, National Eye Institute, National Institutes of Health, 6 Center Drive, Bethesda, MD 20892, USA.
Andrew WaskiewiczDepartment of Biological Sciences, University of Alberta, Edmonton, AB, Canada T6G 2E9, swaroopa@nei.nih.gov david.fitzpatrick@igmm.ed.ac.uk olehmann@ualberta.ca aw@ualberta.ca.
Brian P BrooksUnit on Pediatric, Developmental, and Genetic Eye Disease, National Eye Institute, 10 Center Drive, Bethesda, MD 20892, USA.
Ordan J LehmannDepartment of Ophthalmology and Visual Sciences, University of Alberta, Edmonton, AB, Canada T6G 2H7, Department of Medical Genetics, University of Alberta, Edmonton, AB, Canada T6G 2H7 swaroopa@nei.nih.gov david.fitzpatrick@igmm.ed.ac.uk olehmann@ualberta.ca aw@ualberta.ca.
David R FitzPatrickMRC Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh EH4 2XU, UK, swaroopa@nei.nih.gov david.fitzpatrick@igmm.ed.ac.uk olehmann@ualberta.ca aw@ualberta.ca.
Anand SwaroopNeurobiology-Neurodegeneration and Repair Laboratory, National Eye Institute, National Institutes of Health, 6 Center Drive, Bethesda, MD 20892, USA, swaroopa@nei.nih.gov david.fitzpatrick@igmm.ed.ac.uk olehmann@ualberta.ca aw@ualberta.ca.
National Eye Institute · USUniversity of Alberta · CANational Institutes of Health · USUniversity of Edinburgh · GBMRC Institute of Genetics and Molecular Medicine · GBSun Yat-sen University · CNUniversity Hospital of Zurich · CHWellcome Sanger Institute · GB

Funding

Mechanisms, modeling and therapies of retinal and macular neurodegenerationZIAEY000546 · NEI · NATIONAL EYE INSTITUTE · PI SWAROOP, ANAND · 2015 to 2025
$36.3M
The Genetics of Uveal ColobomaZIAEY000469 · NEI · NATIONAL EYE INSTITUTE · PI BROOKS, BRIAN · 2009 to 2025
$35.2M
Disease mechanism and therapies for retinal degenerationZIAEY000490 · NEI · NATIONAL EYE INSTITUTE · PI LI, TIANSEN · 2010 to 2025
$30.4M
Intramural NIH HHSMedical Research Council MC_PC_U127561093Medical Research Council MC_U127561093Wellcome Trust WT091310
6 · The paper itself

Abstract

Ocular coloboma is a common eye malformation resulting from incomplete fusion of the optic fissure during development. Coloboma is often associated with microphthalmia and/or contralateral anophthalmia. Coloboma shows extensive locus heterogeneity associated with causative mutations identified in genes encoding developmental transcription factors or components of signaling pathways. We report an ultra-rare, heterozygous frameshift mutation in FZD5 (p.Ala219Glufs*49) that was identified independently in two branches of a large family with autosomal dominant non-syndromic coloboma. FZD5 has a single-coding exon and consequently a transcript with this frameshift variant is not a canonical substrate for nonsense-mediated decay. FZD5 encodes a transmembrane receptor with a conserved extracellular cysteine rich domain for ligand binding. The frameshift mutation results in the production of a truncated protein, which retains the Wingless-type MMTV integration site family member-ligand-binding domain, but lacks the transmembrane domain. The truncated protein was secreted from cells, and behaved as a dominant-negative FZD5 receptor, antagonizing both canonical and non-canonical WNT signaling. Expression of the resultant mutant protein caused coloboma and microphthalmia in zebrafish, and disruption of the apical junction of the retinal neural epithelium in mouse, mimicking the phenotype of Fz5/Fz8 compound conditional knockout mutants. Our studies have revealed a conserved role of Wnt-Frizzled (FZD) signaling in ocular development and directly implicate WNT-FZD signaling both in normal closure of the human optic fissure and pathogenesis of coloboma.

Indexed as

Frameshift MutationWnt Signaling PathwayAnimalsDNA Mutational AnalysisFemaleFrizzled ReceptorsHumansMaleMiceMicrophthalmosPedigreeZebrafishFrizzled ReceptorsFZD5 protein, humanFzd5 protein, mouse

Identifiers

PMID26908622
PMCPMC4787907
OpenAlexW2277822746

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.