Evidence map›Paper›PMID 26908598›Full record

ArticleHuman molecular genetics2016

Loss of human disease protein retinitis pigmentosa GTPase regulator (RPGR) differentially affects rod or cone-enriched retina.

Kollu N Rao, Linjing Li, Wei Zhang, Richard S Brush, Raju V S Rajala, Hemant Khanna

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  12. Disruption of RPGR protein interaction network is the common feature of RPGR missense variations that cause XLRP.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  13. Review
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  15. Article
  16. Primary cilia proteins: ciliary and extraciliary sites and functions.Cellular and molecular life sciences : CMLS · 2018
    Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kollu N RaoDepartment of Ophthalmology, University of Massachusetts Medical School, 368 Plantation St, Albert Sherman Center AS6-2043, Worcester, MA 01605, USA and.
Linjing LiDepartment of Ophthalmology, University of Massachusetts Medical School, 368 Plantation St, Albert Sherman Center AS6-2043, Worcester, MA 01605, USA and.
Wei ZhangDepartment of Ophthalmology, University of Massachusetts Medical School, 368 Plantation St, Albert Sherman Center AS6-2043, Worcester, MA 01605, USA and.
Richard S BrushUniversity of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Raju V S RajalaUniversity of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
Hemant KhannaDepartment of Ophthalmology, University of Massachusetts Medical School, 368 Plantation St, Albert Sherman Center AS6-2043, Worcester, MA 01605, USA and hemant.khanna@umassmed.edu.
University of Massachusetts Chan Medical School · USUniversity of Oklahoma Health Sciences Center · US

Funding

Function of Ciliary Disease Protein Retinitis Pigmentosa GTPase Regulator (RPGR)R01EY022372 · NEI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI PAZOUR, GREGORY J · 2012 to 2020
$3.7M
Transmission Electron Microscope for Core EM FacilityS10RR027897 · NCRR · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI CRAIG, ROGER W · 2009 to 2009
$500k
UltramicrotomeS10OD021580 · OD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI HENDRICKS, GREGORY · 2016 to 2016
$53k
NCRR NIH HHS S10RR027897NEI NIH HHS EY022372NEI NIH HHS R01 EY022372NIH HHS S10 OD021580
6 · The paper itself

Abstract

It is unclear how genes, such as RPGR (retinitis pigmentosa guanine triphosphatase regulator) that are expressed in both rods and cones, cause variable disease pathogenesis. Using transcriptomic analysis, we show that loss of RPGR in a rod-dominant mouse retina (Rpgr(ko)) results in predominant alterations in genes involved in actin cytoskeletal dynamics, prior to onset of degeneration. We validated these findings and found an increase in activated RhoA-GTP levels and polymerized F-actin in the Rpgr(ko) mouse retina. To assess the effect of the loss of RPGR in the all-cone region of the human retina, we used Nrl(-/-) (neural retina leucine zipper) mice, to generate Rpgr(ko)::Nrl(-/-) double-knock-out (Rpgr-DKO) mice. These mice exhibited supranormal cone response to light and substantially retained retinal architecture. Transcriptomic analysis revealed predominant up-regulation of retinal pigmented epithelium (RPE)-specific genes associated with visual cycle, whereas fatty acid analysis showed mild decrease in docosahexaenoic acid in the retina of the Rpgr-DKO mice when compared with the Nrl(-/-) mice. Our data reveal new insights into distinct intracellular pathways that are involved in RPGR-associated rod and cone dysfunction and provide a platform to design new treatment modalities.

Indexed as

Gene DeletionActin CytoskeletonAnimalsCarrier ProteinsEye ProteinsGene Expression ProfilingGene Expression RegulationMiceMice, KnockoutRetinal Cone Photoreceptor CellsRetinal Rod Photoreceptor CellsRetinitis PigmentosaCarrier ProteinsEye ProteinsRPGR protein, mouse

Identifiers

PMID26908598
PMCPMC4787904
OpenAlexW2333750360

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.