ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2016
Identification of aerenchyma formation-related QTL in barley that can be effective in breeding for waterlogging tolerance.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.
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Who cites it
31 citing papers in PubMed, 1 synthesis or guideline pooled it, 73 citations in OpenAlex.
- Meta-analysis of major QTL for abiotic stress tolerance in barley and implications for barley breeding.Planta · 2017Pooled it
- Transcriptional signatures associated with waterlogging stress responses and aerenchyma formation in barley root tissue.Annals of botany · 2025Article
- A review of soil waterlogging impacts, mechanisms, and adaptive strategies.Frontiers in plant science · 2025Review
- Evaluating waterlogging stress response and recovery in barley (Hordeum vulgare L.): an image-based phenotyping approach.Plant methods · 2024Article
- Transcriptome and metabolome analyses reveal molecular insights into waterlogging tolerance in Barley.BMC plant biology · 2024Article
- Transcriptional analysis in multiple barley varieties identifies signatures of waterlogging response.Plant direct · 2023Article
- Insights to Gossypium defense response against Verticillium dahliae: the Cotton Cancer.Functional & integrative genomics · 2023Review
- Exploring the Potential of Multiomics and Other Integrative Approaches for Improving Waterlogging Tolerance in Plants.Plants (Basel, Switzerland) · 2023Review
- Transcription factor bHLH121 regulates root cortical aerenchyma formation in maize.Proceedings of the National Academy of Sciences of the United States of America · 2023Article
- Transcriptome analysis of barley (Hordeum vulgare L.) under waterlogging stress, and overexpression of the HvADH4 gene confers waterlogging tolerance in transgenic Arabidopsis.BMC plant biology · 2023Article
- Proteomic exploration reveals a metabolic rerouting due to low oxygen during controlled germination of malting barley (Frontiers in plant science · 2023Article
- Physiological, biochemical, and metabolic changes in diploid and triploid watermelon leaves during flooding.Frontiers in plant science · 2023Article
- Foliar Application of Spermidine Alleviates Waterlogging-Induced Damages to Maize Seedlings by Enhancing Antioxidative Capacity, Modulating Polyamines and Ethylene Biosynthesis.Life (Basel, Switzerland) · 2022Article
- Genome-Wide Association Study Reveals Marker Trait Associations (MTA) for Waterlogging-Triggered Adventitious Roots and Aerenchyma Formation in Barley.International journal of molecular sciences · 2022Article
- Genome-wide association scan and transcriptome analysis reveal candidate genes for waterlogging tolerance in cultivated barley.Frontiers in plant science · 2022Article
- Genome-wide association study reveals quantitative trait loci for waterlogging-triggered adventitious roots and aerenchyma formation in common wheat.Frontiers in plant science · 2022Article
- Identification of QTLs for stagnant flooding tolerance in rice employing genotyping by sequencing of a RIL population derived from Swarna × Rashpanjor.Physiology and molecular biology of plants : an international journal of functional plant biology · 2021Article
- Opportunities for Improving Waterlogging Tolerance in Cereal Crops-Physiological Traits and Genetic Mechanisms.Plants (Basel, Switzerland) · 2021Review
- A barrier to radial oxygen loss helps the root system cope with waterlogging-induced hypoxia.Breeding science · 2021Article
- Genome-Wide Association Study of Waterlogging Tolerance in Barley (Frontiers in plant science · 2021Article
Corrections and comments
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Authors and funding
8 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageAerenchyma formation after 7 days of waterlogging in commercial potting mixture can be a reliable, fast, and widely utilized approach for the selection of waterlogging tolerant barley genotypes. One major QTL for aerenchyma formation after 7 days of waterlogging treatment was identified and the newly developed markers explained 44 % of the phenotypic variance. This QTL can now be effectively used in barley breeding programs. Waterlogging is one of the important limiting conditions for crop yield and productivity. The main feature of waterlogged soils is oxygen deprivation, due to slow gas diffusion in water. Decreased oxygen content in waterlogged soils leads to the oxygen deficiency in plant tissues, resulting in reduced energy availability for plants. Rapidly induced aerenchyma formation is critical to maintaining adequate oxygen supply and overall waterlogging tolerance in barley. In this study, we have proved that quantifying aerenchyma formation after 7 days of waterlogging in commercial potting mixture can be a reliable, fast, and widely utilised approach for the selection of waterlogging tolerant barley genotypes, which is supported by measurements of redox potential (an indicator of anaerobic conditions). This protocol was also used to identify quantitative trait loci (QTL) in a doubled haploid population of barley from the cross between Yerong (tolerant) and Franklin (sensitive) genotypes. The QTL for aerenchyma formation and root porosity were at the same location as the waterlogging tolerance QTL. Seven new markers were developed and added onto this region on chromosome 4H. One major QTL for aerenchyma formation after 7 days waterlogging treatment explained 44.0 % of the phenotypic variance. This successful QTL for aerenchyma formation can be effectively used in the marker assisted selection to improve waterlogging tolerance in barley.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.