Evidence map›Paper›PMID 26907264›Full record

ArticleInternational journal of molecular sciences2016

Cloning and Characterization of a Flavonoid 3'-Hydroxylase Gene from Tea Plant (Camellia sinensis).

Tian-Shan Zhou, Rui Zhou, You-Ben Yu, Yao Xiao, Dong-Hua Li, Bin Xiao, Oliver Yu, Ya-Jun Yang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Application of Multi-Perspectives in Tea Breeding and the Main Directions.International journal of molecular sciences · 2023
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Bioconversion of Callus-Produced Precursors to Silymarin Derivatives inInternational journal of molecular sciences · 2021
    Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Tian-Shan ZhouHorticulture, Northwest A&F University, 3 Taicheng Road, Yangling 712100, China. zhoutianshan@nwsuaf.edu.cn.
Rui ZhouConagen Inc., 15 DeAngelo Dr., Bedford, MA 01730, USA. rui.zhou@conagen-inc.com.
You-Ben YuHorticulture, Northwest A&F University, 3 Taicheng Road, Yangling 712100, China. yyben@163.com.
Yao XiaoHorticulture, Northwest A&F University, 3 Taicheng Road, Yangling 712100, China. xiaoyao1583@gmail.com.
Dong-Hua LiHorticulture, Northwest A&F University, 3 Taicheng Road, Yangling 712100, China. lidhua29@163.com.
Bin XiaoHorticulture, Northwest A&F University, 3 Taicheng Road, Yangling 712100, China. xiaobin@nwsuaf.edu.cn.
Oliver YuConagen Inc., 15 DeAngelo Dr., Bedford, MA 01730, USA. Oliver.yu@conagen-inc.com.
Ya-Jun YangTea Research Institute, Chinese Academy of Agricultural Sciences, 9 Meiling South Road, Hangzhou 310008, China. yjyang@mail.tricaas.com.
Northwest A&F University · CNConagen (United States) · USTea Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tea leaves contain abundant flavan-3-ols, which include dihydroxylated and trihydroxylated catechins. Flavonoid 3'-hydroxylase (F3'H: EC 1.14.13.21) is one of the enzymes in the establishment of the hydroxylation pattern. A gene encoding F3'H, designated as CsF3'H, was isolated from Camellia sinensis with a homology-based cloning technique and deposited in the GenBank (GenBank ID: KT180309). Bioinformatic analysis revealed that CsF3'H was highly homologous with the characterized F3'Hs from other plant species. Four conserved cytochrome P450-featured motifs and three F3'H-specific conserved motifs were discovered in the protein sequence of CsF3'H. Enzymatic analysis of the heterologously expressed CsF3'H in yeast demonstrated that tea F3'H catalyzed the 3'-hydroxylation of naringenin, dihydrokaempferol and kaempferol. Apparent Km values for these substrates were 17.08, 143.64 and 68.06 μM, and their apparent Vmax values were 0.98, 0.19 and 0.44 pM·min(-1), respectively. Transcription level of CsF3'H in the new shoots, during tea seed germination was measured, along with that of other key genes for flavonoid biosynthesis using real-time PCR technique. The changes in 3',4'-flavan-3-ols, 3',4',5'-flavan-3-ols and flavan-3-ols, were consistent with the expression level of CsF3'H and other related genes in the leaves. In the study of nitrogen supply for the tea plant growth, our results showed the expression level of CsF3'H and all other tested genes increased in response to nitrogen depletion after 12 days of treatment, in agreement with a corresponding increase in 3',4'-catechins, 3',4',5'-catechins and flavan 3-ols content in the leaves. All these results suggest the importance of CsF3'H in the biosynthesis of 3',4'-catechins, 3',4',5'-catechins and flavan 3-ols in tea leaves.

Indexed as

Camellia sinensisCloning, MolecularComputational BiologyCytochrome P-450 Enzyme SystemFlavonoidsGerminationPlant LeavesPlant ProteinsPlant ShootsSequence Homology, Nucleic AcidCytochrome P-450 Enzyme Systemflavonoid 3'-hydroxylaseFlavonoidsPlant ProteinsCamellia sinensisflavan 3-olsflavonoid 3′-hydroxylaseheterologous expressionnitrogen depletion

Identifiers

PMID26907264
PMCPMC4783990
OpenAlexW2286638229

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.