Evidence map›Paper›PMID 26906904›Full record

ArticleBiomedical microdevices2016

Polyethersulfone improves isothermal nucleic acid amplification compared to current paper-based diagnostics.

J C Linnes, N M Rodriguez, L Liu, C M Klapperich

Open access · greenAbstract readComparative Study
In one paragraph

Article in Biomedical microdevices, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 68 citations in OpenAlex.

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  16. Paper-based microfluidics for DNA diagnostics of malaria in low resource underserved rural communities.Proceedings of the National Academy of Sciences of the United States of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

J C LinnesDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.ORCID http://orcid.org/0000-0003-4962-0908
N M RodriguezDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.
L LiuDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA.
C M KlapperichDepartment of Biomedical Engineering, Boston University, Boston, MA, 02215, USA. catherin@bu.edu.
Boston University · US

Funding

Center for Innovation in Point of Care Technologies for the Future of Cancer CareU54EB015403 · NIBIB · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI KLAPPERICH, CATHERINE M. · 2012 to 2016
$8.9M
Rapid molecular diagnostic for chlamydia and gonorrhea at the point-of-careR01AI113927 · NIAID · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI KLAPPERICH, CATHERINE M. · 2015 to 2018
$1.4M
A Rapid Instrument Free Molecular Diagnostic for B. PertussisF32AI110023 · NIAID · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI LINNES, JACQUELINE · 2014 to 2015
$63k
NIAID NIH HHS F32 AI110023NIAID NIH HHS F32-AI110023NIAID NIH HHS R01 AI113927NIBIB NIH HHS U54 EB015403NIBIB NIH HHS U54-EB015403NIBIB NIH HHS U54-EB015403-S1
6 · The paper itself

Abstract

Devices based on rapid, paper-based, isothermal nucleic acid amplification techniques have recently emerged with the potential to fill a growing need for highly sensitive point-of-care diagnostics throughout the world. As this field develops, such devices will require optimized materials that promote amplification and sample preparation. Herein, we systematically investigated isothermal nucleic acid amplification in materials currently used in rapid diagnostics (cellulose paper, glass fiber, and nitrocellulose) and two additional porous membranes with upstream sample preparation capabilities (polyethersulfone and polycarbonate). We compared amplification efficiency from four separate DNA and RNA targets (Bordetella pertussis, Chlamydia trachomatis, Neisseria gonorrhoeae, and Influenza A H1N1) within these materials using two different isothermal amplification schemes, helicase dependent amplification (tHDA) and loop-mediated isothermal amplification (LAMP), and traditional PCR. We found that the current paper-based diagnostic membranes inhibited nucleic acid amplification when compared to membrane-free controls; however, polyethersulfone allowed for efficient amplification in both LAMP and tHDA reactions. Further, observing the performance of traditional PCR amplification within these membranes was not predicative of their effects on in situ LAMP and tHDA. Polyethersulfone is a new material for paper-based nucleic acid amplification, yet provides an optimal support for rapid molecular diagnostics for point-of-care applications.

Indexed as

Diagnostic Techniques and ProceduresPaperPoint-of-Care SystemsDNA, BacterialDNA HelicasesInfluenza A Virus, H1N1 SubtypeMembranes, ArtificialNucleic Acid Amplification TechniquesPolymersPorosityRNA, ViralSulfonesDNA, BacterialDNA HelicasesMembranes, Artificialpolyether sulfonePolymersRNA, ViralSulfonesIsothermal nucleic acid amplificationPaper-based diagnostic devicePoint-of-care diagnosticsPolyethersulfone

Identifiers

PMID26906904
PMCPMC4855516
OpenAlexW2282221335

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.