Evidence map›Paper›PMID 26905588›Full record

SynthesisCarcinogenesis2016

Polymorphisms of the centrosomal gene (FGFR1OP) and lung cancer risk: a meta-analysis of 14,463 cases and 44,188 controls.

Xiaozheng Kang, Hongliang Liu, Mark W Onaitis, Zhensheng Liu, Kouros Owzar, Younghun Han, Li Su, Yongyue Wei, Rayjean J Hung, Yonathan Brhane and 15 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Carcinogenesis, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 10 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 17 institutions in 8 countries.

Xiaozheng KangDuke Cancer Institute and.
Hongliang LiuDuke Cancer Institute and.
Mark W OnaitisDuke Cancer Institute and.
Zhensheng LiuDuke Cancer Institute and.
Kouros OwzarDuke Cancer Institute and.
Younghun HanCommunity and Family Medicine , Geisel School of Medicine , Dartmouth College , Hanover , NH 03755 , USA.
Li SuMassachusetts General Hospital, Boston, MA 02114, USA.
Yongyue WeiMassachusetts General Hospital, Boston, MA 02114, USA.
Rayjean J HungLunenfeld-Tanenbaum Research Institute of Mount Sinai Hospital , Toronto , Ontario , Canada.
Yonathan BrhaneLunenfeld-Tanenbaum Research Institute of Mount Sinai Hospital , Toronto , Ontario , Canada.
John McLaughlinPublic Health Ontario , Toronto , Ontario M5T 3L9 , Canada.
Paul BrennanGenetic Epidemiology Group , International Agency for Research on Cancer (IARC) , 69372 Lyon , France.
Heike BickeböllerDepartment of Genetic Epidemiology , University Medical Center , Georg-August-University Göttingen , 37073 Göttingen , Germany.
Albert RosenbergerDepartment of Genetic Epidemiology , University Medical Center , Georg-August-University Göttingen , 37073 Göttingen , Germany.
Richard S HoulstonDivision of Genetics and Epidemiology , the Institute of Cancer Research , London SW7 3RP , UK.
Neil CaporasoDivision of Cancer Epidemiology and Genetics , National Cancer Institute , National Institutes of Health , Bethesda , MD 20892 , USA.
Maria Teresa LandiDivision of Cancer Epidemiology and Genetics , National Cancer Institute , National Institutes of Health , Bethesda , MD 20892 , USA.
Joachim HeinrichHelmholtz Centre Munich , German Research Centre for Environmental Health , Institute of Epidemiology I , 85764 Neuherberg , Germany.
Angela RischDepartment of Molecular Biology , University of Salzburg , 5020 Salzburg , Austria and.
Xifeng WuDepartment of Epidemiology , University of Texas MD Anderson Cancer Center , Houston , TX 77030 , USA.
Yuanqing YeDepartment of Epidemiology , University of Texas MD Anderson Cancer Center , Houston , TX 77030 , USA.
David C ChristianiMassachusetts General Hospital, Boston, MA 02114, USA.
Christopher I AmosCommunity and Family Medicine , Geisel School of Medicine , Dartmouth College , Hanover , NH 03755 , USA.
Qingyi WeiDuke Cancer Institute and.
Transdisciplinary Research in Cancer of the Lung (TRICL) Research Team
Cancer Institute (WIA) · INDartmouth College · USDuke University Hospital · USHarvard University · USNational Cancer Institute · USThe University of Texas MD Anderson Cancer Center · USUniversity of Göttingen · DECentre International de Recherche sur le Cancer · FRDuke Medical Center · USDuke University · USHelmholtz Zentrum München · DEInstitute of Cancer Research · GBLunenfeld-Tanenbaum Research Institute · CAMassachusetts General Hospital · USMount Sinai Hospital · CAPublic Health Ontario · CAUniversity of Salzburg · AT

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Fabien Delerue · 1985 to 2026
$290.8M
Women's Cancer Research ProgramP30CA014236 · NCI · DUKE UNIVERSITY · PI JOHN N. NORTON · 1985 to 2026
$174.8M
Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
UNIVERSITY OF TEXAS--SPORE IN LUNG CANCERP50CA070907 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HEYMACH, JOHN V., MINNA, JOHN D. · 1996 to 2024
$57.4M
JH/CIDR Genotyping for Genome-Wide Association StudiesU01HG004438 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2007 to 2011
$24.2M
THE CAROTENE AND RETINOL EFFICACY TRIAL (CARET)U01CA063673 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GOODMAN, GARY E · 1994 to 2006
$13.0M
Translational studies of Hsp90 inhibitors in NSCLCP50CA090578 · NCI · DANA-FARBER CANCER INST · PI YEAP, BEOW Y · 2008 to 2012
$11.4M
Statistical Methods for Analysis of Massive Genetic and Genomic Data in Cancer ResearchR35CA197449 · NCI · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI XIHONG LIN · 2015 to 2026
$10.9M
Transdisciplinary Research in Cancer of the Lung (TRICL)U19CA148127 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI AMOS, CHRISTOPHER I., LE MARCHAND, LOIC · 2010 to 2014
$10.9M
Genes contributing to nicotine dependence in humansR01DA017932 · NIDA · DECODE GENETICS, INC. · PI STEFANSSON, KARI · 2005 to 2015
$9.6M
PROSTATE, LUNG, COLORECTAL, &OVARIAN CANCER SCREENINGN01CN025476 · CN · WESTAT, INC. · PI O'BRIEN, BARBARA B · 1992 to 2000
$7.9M
Genome Wide Association Coordinating CenterU01HG004446 · NHGRI · UNIVERSITY OF WASHINGTON · PI WEIR, BRUCE S. · 2007 to 2011
$6.6M
Cancer Research UK C1298/A8362Cancer Research UK C1298/A8780CCR NIH HHS N01-RC-37004CCR NIH HHS N01-RC-45035NCI NIH HHS 5R01CA055769NCI NIH HHS 5R01CA121197NCI NIH HHS 5R01CA127219NCI NIH HHS 5R01CA133996NCI NIH HHS CA074386NCI NIH HHS CA090578NCI NIH HHS CA092824NCI NIH HHS K07 CA160753NCI NIH HHS K07CA160753NCI NIH HHS N01 CN025404NCI NIH HHS N01 CN025511NCI NIH HHS N01 CN025512NCI NIH HHS N01 CN025513NCI NIH HHS N01 CN025514NCI NIH HHS N01 CN025515NCI NIH HHS N01 CN025516NCI NIH HHS N01 CN025518NCI NIH HHS N01 CN025522NCI NIH HHS N01 CN025524NCI NIH HHS N01-CN-25404NCI NIH HHS N01-CN-25476NCI NIH HHS N01-CN-25511NCI NIH HHS N01-CN-25512NCI NIH HHS N01-CN-25513NCI NIH HHS N01-CN-25514NCI NIH HHS N01-CN-25515NCI NIH HHS N01-CN-25516NCI NIH HHS N01-CN-25518NCI NIH HHS N01-CN-25522NCI NIH HHS N01-CN-25524NCI NIH HHS N01-CN-45165NCI NIH HHS N01-CN-75022NCI NIH HHS P20 CA090578NCI NIH HHS P30 CA014236NCI NIH HHS P30 CA016672NCI NIH HHS P30 CA023108NCI NIH HHS P50 CA070907NCI NIH HHS P50 CA090578NCI NIH HHS P50 CA70907NCI NIH HHS R01 CA055769NCI NIH HHS R01 CA074386NCI NIH HHS R01 CA092039NCI NIH HHS R01 CA092824NCI NIH HHS R01 CA111703NCI NIH HHS R01 CA121197NCI NIH HHS R01CA121197NCI NIH HHS R01 CA127219NCI NIH HHS R01CA127219NCI NIH HHS R01 CA133996NCI NIH HHS R01 CA55769NCI NIH HHS R35 CA197449NCI NIH HHS U01 CA063673NCI NIH HHS U19 CA148127NCI NIH HHS U19CA148127NCI NIH HHS UO1 CA63673NHGRI NIH HHS HHSN268200782096CNHGRI NIH HHS U01 HG004438NHGRI NIH HHS U01HG004438NHGRI NIH HHS U01 HG004446NHLBI NIH HHS R01HL091172-01NIDA NIH HHS DA017932NIDA NIH HHS R01 DA017932World Health Organization 001
6 · The paper itself

Abstract

Centrosome abnormalities are often observed in premalignant lesions and in situ tumors and have been associated with aneuploidy and tumor development. We investigated the associations of 9354 single-nucleotide polymorphisms (SNPs) in 106 centrosomal genes with lung cancer risk by first using the summary data from six published genome-wide association studies (GWASs) of the Transdisciplinary Research in Cancer of the Lung (TRICL) (12,160 cases and 16 838 controls) and then conducted in silico replication in two additional independent lung cancer GWASs of Harvard University (984 cases and 970 controls) and deCODE (1319 cases and 26,380 controls). A total of 44 significant SNPs with false discovery rate (FDR) ≤ 0.05 were mapped to one novel gene FGFR1OP and two previously reported genes (TUBB and BRCA2). After combined the results from TRICL with those from Harvard and deCODE, the most significant association (P combined = 8.032 × 10(-6)) was with rs151606 within FGFR1OP. The rs151606 T>G was associated with an increased risk of lung cancer [odds ratio (OR) = 1.10, 95% confidence interval (95% CI) = 1.05-1.14]. Another significant tagSNP rs12212247 T>C (P combined = 9.589 × 10(-6)) was associated with a decreased risk of lung cancer (OR = 0.93, 95% CI = 0.90-0.96). Further in silico functional analyzes revealed that rs151606 might affect transcriptional regulation and result in decreased FGFR1OP expression (P trend = 0.022). The findings shed some new light on the role of centrosome abnormalities in the susceptibility to lung carcinogenesis.

Indexed as

FemaleGene Expression Regulation, NeoplasticGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansLung NeoplasmsMalePolymorphism, Single NucleotideProto-Oncogene ProteinsRisk FactorsCEP43 protein, humanProto-Oncogene Proteins

Identifiers

PMID26905588
PMCPMC4804128
OpenAlexW2285252263

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.