Evidence map›Paper›PMID 26904732›Full record

ArticleInternational journal of bacteriology2014

Evaluation of the Pattern of EPIYA Motifs in the Helicobacter pylori cagA Gene of Patients with Gastritis and Gastric Adenocarcinoma from the Brazilian Amazon Region.

Adenielson Vilar E Silva, Mario Ribeiro da Silva Junior, Ruth Maria Dias Ferreira Vinagre, Kemper Nunes Santos, Renata Aparecida Andrade da Costa, Amanda Alves Fecury, Juarez Antônio Simões Quaresma, Luisa Caricio Martins

Open access · hybridAbstract read
In one paragraph

Article in International journal of bacteriology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 2 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 2 syntheses or guidelines pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  5. Article
  6. BioMed research international · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Adenielson Vilar E SilvaLaboratório de Patologia Clínica, Núcleo de Medicina Tropical, Universidade Federal do Pará, Avenida Generalissimo Deodoro No. 92, Umarizal, 66095-360 Belém, PA, Brazil.
Mario Ribeiro da Silva JuniorLaboratório de Patologia Clínica, Núcleo de Medicina Tropical, Universidade Federal do Pará, Avenida Generalissimo Deodoro No. 92, Umarizal, 66095-360 Belém, PA, Brazil; Núcleo de Medicina Tropical, Laboratório de Patologia Clínica das Doênças Tropicais, Universidade Federal do Pará, Belém, PA, Brazil.
Ruth Maria Dias Ferreira VinagreDepartamento de Gastroenterologia, Hospital Ophir Loyola, Belém, PA, Brazil.
Kemper Nunes SantosLaboratório de Patologia Clínica, Núcleo de Medicina Tropical, Universidade Federal do Pará, Avenida Generalissimo Deodoro No. 92, Umarizal, 66095-360 Belém, PA, Brazil; Núcleo de Medicina Tropical, Laboratório de Patologia Clínica das Doênças Tropicais, Universidade Federal do Pará, Belém, PA, Brazil.
Renata Aparecida Andrade da CostaLaboratório de Patologia Clínica, Núcleo de Medicina Tropical, Universidade Federal do Pará, Avenida Generalissimo Deodoro No. 92, Umarizal, 66095-360 Belém, PA, Brazil; Núcleo de Medicina Tropical, Laboratório de Patologia Clínica das Doênças Tropicais, Universidade Federal do Pará, Belém, PA, Brazil.
Amanda Alves FecuryLaboratório de Patologia Clínica, Núcleo de Medicina Tropical, Universidade Federal do Pará, Avenida Generalissimo Deodoro No. 92, Umarizal, 66095-360 Belém, PA, Brazil; Núcleo de Medicina Tropical, Laboratório de Patologia Clínica das Doênças Tropicais, Universidade Federal do Pará, Belém, PA, Brazil.
Juarez Antônio Simões QuaresmaLaboratório de Patologia Clínica, Núcleo de Medicina Tropical, Universidade Federal do Pará, Avenida Generalissimo Deodoro No. 92, Umarizal, 66095-360 Belém, PA, Brazil; Núcleo de Medicina Tropical, Laboratório de Patologia Clínica das Doênças Tropicais, Universidade Federal do Pará, Belém, PA, Brazil.
Luisa Caricio MartinsLaboratório de Patologia Clínica, Núcleo de Medicina Tropical, Universidade Federal do Pará, Avenida Generalissimo Deodoro No. 92, Umarizal, 66095-360 Belém, PA, Brazil; Núcleo de Medicina Tropical, Laboratório de Patologia Clínica das Doênças Tropicais, Universidade Federal do Pará, Belém, PA, Brazil.
Universidade Federal do Pará · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Helicobacter pylori is associated with the development of different diseases. The clinical outcome of infection may be associated with the cagA bacterial genotype. The aim of this study was to determine the EPIYA patterns of strains isolated from patients with gastritis and gastric adenocarcinoma and correlate these patterns with the histopathological features. Gastric biopsy samples were selected from 384 patients infected with H. pylori, including 194 with chronic gastritis and 190 with gastric adenocarcinoma. The presence of the cagA gene and the EPIYA motif was determined by PCR. The cagA gene was more prevalent in patients with gastric cancer and was associated with a higher degree of inflammation, neutrophil activity, and development of intestinal metaplasia. The number of EPIYA-C repeats showed a significant association with an increased risk of gastric carcinoma (OR = 3.79, 95% CI = 1.92-7.46, and P = 0.002). A larger number of EPIYA-C motifs were also associated with intestinal metaplasia. In the present study, infection with H. pylori strains harboring more than one EPIYA-C motif in the cagA gene was associated with the development of intestinal metaplasia and gastric adenocarcinoma but not with neutrophil activity or degree of inflammation.

Identifiers

PMID26904732
PMCPMC4745444
OpenAlexW1991464006

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.