ArticleFrontiers in plant science2016
Genome-Wide Identification and Expression Analysis of the WRKY Gene Family in Cassava.
Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.
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81 citing papers in PubMed, 149 citations in OpenAlex.
- High-resolution comparative genomics and compositional analysis of WRKY transcription factors across seven cereal and model plant genomes.BMC plant biology · 2026Article
- Genome-wide identification, expression pattern and subcellular localization analysis of the WRKY gene family under abiotic stresses in Litchi chinensis.BMC plant biology · 2026Article
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- PDF gene family in four Cucurbitaceae species: genome-wide identification, classification and expression in response to biotic stress.BMC plant biology · 2025Article
- Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2025Article
- Roles of WRKY Transcription Factors in Response to Sri Lankan Cassava Mosaic Virus Infection in Susceptible and Tolerant Cassava Cultivars.Plants (Basel, Switzerland) · 2025Article
- Identification and characterization of the glutamine synthetase gene family in oat (Frontiers in plant science · 2025Article
- Genome-wide survey and expression analysis of JAZ genes in watermelon (Citrullus lanatus).Molecular biology reports · 2024Article
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- High-quality chromosome-level genomic insights into molecular adaptation to low-temperature stress in Madhuca longifolia in southern subtropical China.BMC genomics · 2024Article
- Comprehensive Expression Analysis of the WRKY Gene Family inInternational journal of molecular sciences · 2024Article
- Genome-wide identification of the key kinesin genes during fiber and boll development in upland cotton (Gossypium hirsutum L.).Molecular genetics and genomics : MGG · 2024Article
- Genome and Transcriptome Analysis of theGenes · 2024Article
- Genome-wide identification of the key Kinesin genes during fiber and boll development in upland cotton (Gossypium hirsutum L).Molecular genetics and genomics : MGG · 2024Article
- Genome-wide investigation of WRKY gene family inFrontiers in plant science · 2024Article
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- Genome-Wide Identification and Analysis of WRKY Gene Family inInternational journal of molecular sciences · 2023Article
- Analysis of bZIP gene family in lotus (Nelumbo) and functional study of NnbZIP36 in regulating anthocyanin synthesis.BMC plant biology · 2023Article
- Genome-Wide Identification and Analysis of theGenes · 2023Article
21 more citing papers are in PubMed but not listed here.
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Authors and funding
9 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The WRKY family, a large family of transcription factors (TFs) found in higher plants, plays central roles in many aspects of physiological processes and adaption to environment. However, little information is available regarding the WRKY family in cassava (Manihot esculenta). In the present study, 85 WRKY genes were identified from the cassava genome and classified into three groups according to conserved WRKY domains and zinc-finger structure. Conserved motif analysis showed that all of the identified MeWRKYs had the conserved WRKY domain. Gene structure analysis suggested that the number of introns in MeWRKY genes varied from 1 to 5, with the majority of MeWRKY genes containing three exons. Expression profiles of MeWRKY genes in different tissues and in response to drought stress were analyzed using the RNA-seq technique. The results showed that 72 MeWRKY genes had differential expression in their transcript abundance and 78 MeWRKY genes were differentially expressed in response to drought stresses in different accessions, indicating their contribution to plant developmental processes and drought stress resistance in cassava. Finally, the expression of 9 WRKY genes was analyzed by qRT-PCR under osmotic, salt, ABA, H2O2, and cold treatments, indicating that MeWRKYs may be involved in different signaling pathways. Taken together, this systematic analysis identifies some tissue-specific and abiotic stress-responsive candidate MeWRKY genes for further functional assays in planta, and provides a solid foundation for understanding of abiotic stress responses and signal transduction mediated by WRKYs in cassava.
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