Evidence map›Paper›PMID 26903974›Full record

ArticleFrontiers in microbiology2016

Structure and Interactions of a Dimeric Variant of sHIP, a Novel Virulence Determinant of Streptococcus pyogenes.

Carl Diehl, Magdalena Wisniewska, Inga-Maria Frick, Werner Streicher, Lars Björck, Johan Malmström, Mats Wikström

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Carl DiehlProtein Function and Interactions Group, Faculty of Health and Medical Sciences, The Novo Nordisk Foundation Center for Protein Research, University of CopenhagenCopenhagen, Denmark; SARomics BiostructuresLund, Sweden.
Magdalena WisniewskaProtein Function and Interactions Group, Faculty of Health and Medical Sciences, The Novo Nordisk Foundation Center for Protein Research, University of CopenhagenCopenhagen, Denmark; Malopolska Centre of BiotechnologyKrakow, Poland.
Inga-Maria FrickDivision of Infection Medicine, Department of Clinical Sciences, Lund University Lund, Sweden.
Werner StreicherProtein Function and Interactions Group, Faculty of Health and Medical Sciences, The Novo Nordisk Foundation Center for Protein Research, University of CopenhagenCopenhagen, Denmark; Novozymes A/SBagsvaerd, Denmark.
Lars BjörckDivision of Infection Medicine, Department of Clinical Sciences, Lund University Lund, Sweden.
Johan MalmströmDivision of Infection Medicine, Department of Clinical Sciences, Lund University Lund, Sweden.
Mats WikströmProtein Function and Interactions Group, Faculty of Health and Medical Sciences, The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen Copenhagen, Denmark.
Lund University · SEUniversity of Copenhagen · DKNovo Nordisk Foundation · DKNovozymes (Denmark) · DK

Funding

European Research Council 309831
6 · The paper itself

Abstract

Streptococcus pyogenes is one of the most significant bacterial pathogens in the human population mostly causing superficial and uncomplicated infections (pharyngitis and impetigo) but also invasive and life-threatening disease. We have previously identified a virulence determinant, protein sHIP, which is secreted at higher levels by an invasive compared to a non-invasive strain of S. pyogenes. The present work presents a further characterization of the structural and functional properties of this bacterial protein. Biophysical and structural studies have shown that protein sHIP forms stable tetramers both in the crystal and in solution. The tetramers are composed of four helix-loop-helix motifs with the loop regions connecting the helices displaying a high degree of flexibility. Owing to interactions at the tetramer interface, the observed tetramer can be described as a dimer of dimers. We identified three residues at the tetramer interface (Leu84, Leu88, Tyr95), which due to largely non-polar side-chains, could be important determinants for protein oligomerization. Based on these observations, we produced a sHIP variant in which these residues were mutated to alanines. Biophysical experiments clearly indicated that the sHIP mutant appear only as dimers in solution confirming the importance of the interfacial residues for protein oligomerisation. Furthermore, we could show that the sHIP mutant interacts with intact histidine-rich glycoprotein (HRG) and the histidine-rich repeats in HRG, and inhibits their antibacterial activity to the same or even higher extent as compared to the wild type protein sHIP. We determined the crystal structure of the sHIP mutant, which, as a result of the high quality of the data, allowed us to improve the existing structural model of the protein. Finally, by employing NMR spectroscopy in solution, we generated a model for the complex between the sHIP mutant and an HRG-derived heparin-binding peptide, providing further molecular details into the interactions involving protein sHIP.

Indexed as

host-pathogen relationshipprotein-protein interactionsproteomicsstructural biologyvirulence factors

Identifiers

PMID26903974
PMCPMC4742562
OpenAlexW2282678769

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.