Evidence map›Paper›PMID 26903655›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Contraction of the type I IFN locus and unusual constitutive expression of IFN-α in bats.

Peng Zhou, Mary Tachedjian, James W Wynne, Victoria Boyd, Jie Cui, Ina Smith, Christopher Cowled, Justin H J Ng, Lawrence Mok, Wojtek P Michalski and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 203 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
203citing papers in PubMed, 1 pooled it
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

203 citing papers in PubMed, 1 synthesis or guideline pooled it, 333 citations in OpenAlex.

  1. A metaanalysis of bat phylogenetics and positive selection based on genomes and transcriptomes from 18 species.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Pooled it
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  5. SARS-CoV-2 virus infection ofbioRxiv : the preprint server for biology · 2026
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143 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Peng ZhouAustralian Animal Health Laboratory, Health and Biosecurity Business Unit, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia; Program in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore 169857; peng.zhou@duke-nus.edu.sg michelle.baker@csiro.au.
Mary TachedjianAustralian Animal Health Laboratory, Health and Biosecurity Business Unit, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia;
James W WynneAustralian Animal Health Laboratory, Health and Biosecurity Business Unit, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia;
Victoria BoydAustralian Animal Health Laboratory, Health and Biosecurity Business Unit, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia;
Jie CuiProgram in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore 169857;ORCID http://orcid.org/0000-0001-8176-9951
Ina SmithAustralian Animal Health Laboratory, Health and Biosecurity Business Unit, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia;
Christopher CowledAustralian Animal Health Laboratory, Health and Biosecurity Business Unit, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia;
Justin H J NgAustralian Animal Health Laboratory, Health and Biosecurity Business Unit, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia; Program in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore 169857;
Lawrence MokAustralian Animal Health Laboratory, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia;
Wojtek P MichalskiAustralian Animal Health Laboratory, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia;
Ian H MendenhallProgram in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore 169857;
Gilda TachedjianCentre for Biomedical Research, Burnet Institute, Melbourne, Victoria 3004, Australia; Department of Microbiology, Monash University, Clayton, Victoria 3168, Australia; Department of Infectious Diseases, Monash University, Melbourne, Victoria 3004, Australia; Department of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Parkville, Victoria 3010, Australia.
Lin-Fa WangAustralian Animal Health Laboratory, Health and Biosecurity Business Unit, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia; Program in Emerging Infectious Diseases, Duke-National University of Singapore Medical School, Singapore 169857;ORCID http://orcid.org/0000-0003-2752-0535
Michelle L BakerAustralian Animal Health Laboratory, Health and Biosecurity Business Unit, Commonwealth Scientific and Industrial Research Organisation, Geelong, Victoria 3220, Australia; peng.zhou@duke-nus.edu.sg michelle.baker@csiro.au.
Commonwealth Scientific and Industrial Research Organisation · AUNational University of Singapore · SGBurnet Institute · AU

Funding

UNM COBRE: THEORETICAL STUDY OF SPECIFICITY OF RNA SILENCING MECHANISMP20RR018754 · NCRR · UNIVERSITY OF NEW MEXICO · PI LOKER, ERIC SAMUEL · 2003 to 2011
$16.7M
NCRR NIH HHS P20 RR018754NCRR NIH HHS P20RR018754
6 · The paper itself

Abstract

Bats harbor many emerging and reemerging viruses, several of which are highly pathogenic in other mammals but cause no clinical signs of disease in bats. To determine the role of interferons (IFNs) in the ability of bats to coexist with viruses, we sequenced the type I IFN locus of the Australian black flying fox, Pteropus alecto, providing what is, to our knowledge, the first gene map of the IFN region of any bat species. Our results reveal a highly contracted type I IFN family consisting of only 10 IFNs, including three functional IFN-α loci. Furthermore, the three IFN-α genes are constitutively expressed in unstimulated bat tissues and cells and their expression is unaffected by viral infection. Constitutively expressed IFN-α results in the induction of a subset of IFN-stimulated genes associated with antiviral activity and resistance to DNA damage, providing evidence for a unique IFN system that may be linked to the ability of bats to coexist with viruses.

Indexed as

Gene Expression ProfilingAnimalsBase SequenceCell LineChiropteraChromosome MappingEvolution, MolecularHEK293 CellsHendra VirusHost-Pathogen InteractionsHumansImmunoblottingInterferon-alphaInterferon Type IMolecular Sequence DataReverse Transcriptase Polymerase Chain ReactionInterferon-alphaInterferon Type Ibat immunologyinnate immunityinterferon

Identifiers

PMID26903655
PMCPMC4790985
OpenAlexW2287025468

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.