Evidence map›Paper›PMID 26902949›Full record

ArticleThe international journal of neuropsychopharmacology2016

The Expression of the Suicide-Associated Gene SKA2 Is Decreased in the Prefrontal Cortex of Suicide Victims but Not of Nonsuicidal Patients.

Ghanshyam N Pandey, Hooriyah S Rizavi, Hui Zhang, Runa Bhaumik, Xinguo Ren

Open access · goldAbstract read
In one paragraph

Article in The international journal of neuropsychopharmacology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it, 48 citations in OpenAlex.

  1. Genetics and epigenetics of self-injurious thoughts and behaviors: Systematic review of the suicide literature and methodological considerations.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2022
    Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. SKA2 enhances stress-related glucocorticoid receptor signaling through FKBP4-FKBP5 interactions in neurons.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Oncogenic role ofTranslational cancer research · 2024
    Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ghanshyam N PandeyUniversity of Illinois at Chicago, Department of Psychiatry, Chicago, IL. Gpandey@psych.uic.edu.
Hooriyah S RizaviUniversity of Illinois at Chicago, Department of Psychiatry, Chicago, IL.
Hui ZhangUniversity of Illinois at Chicago, Department of Psychiatry, Chicago, IL.
Runa BhaumikUniversity of Illinois at Chicago, Department of Psychiatry, Chicago, IL.
Xinguo RenUniversity of Illinois at Chicago, Department of Psychiatry, Chicago, IL.
University of Illinois Chicago · US

Funding

Toll-like Receptors and Cytokines in Depression and Suicide BrainR01MH098554 · NIMH · UNIVERSITY OF ILLINOIS AT CHICAGO · PI PANDEY, GHANSHYAM N · 2012 to 2016
$2.0M
NIMH NIH HHS R01 MH098554
6 · The paper itself

Abstract

backgroundRecent study of genome-wide DNA methylation profiling in the postmortem brain of suicidal and nonsuicidal subjects found that gene expression of spindle and kinetochore associated complex subunit 2 (SKA2) is decreased in the postmortem brain of suicide victims compared with nonsuicidal, nonpsychiatric control subjects.

methodsTo determine if decreased SKA2 is specific to suicide and independent of diagnosis, we determined gene and protein expression of SKA2 in the prefrontal cortex obtained from suicide victims (n= 52), nonsuicidal psychiatric subjects (n= 27), and normal controls (n= 24). We determined gene expression by quantitative PCR technique and protein expression by Western blot. The postmortem brain samples were obtained from the Maryland Psychiatric Research Center.

resultsWe found that protein and gene expression of SKA2 was significantly reduced in the prefrontal cortex of suicide victims compared with normal control subjects and nonsuicidal patients. We also found that SKA2 protein and gene expression in depressed suicide victims, schizophrenic suicide victims, and suicide victims with substance abuse and/or conduct disorders was significantly decreased compared with normal control subjects and also with nonsuicidal depressed or schizophrenic subjects.

conclusionsThis study shows that decreased gene and protein expression of SKA2 observed in the prefrontal cortex of suicide victims is specific to suicide, which was not observed in the brain of nonsuicidal patients. It also indicates reduced SKA2 expression in suicide is independent of psychiatric diagnosis, since it is observed in all diagnostic groups studied. Therefore, SKA2 may be a potential biomarker for suicide.

Indexed as

Down-RegulationSuicideAdultAgedAged, 80 and overCase-Control StudiesChromosomal Proteins, Non-HistoneFemaleGenetic Predisposition to DiseaseHumansMaleMental DisordersMiddle AgedPrefrontal CortexYoung AdultChromosomal Proteins, Non-HistoneSKA2 protein, humandepressionpostmortem brainschizophreniaSKA2suicide

Identifiers

PMID26902949
PMCPMC5006192
OpenAlexW2288507071

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.