Evidence map›Paper›PMID 26902325›Full record

ArticleScientific reports2016

Comparative transcriptome and proteome analysis to reveal the biosynthesis of gold nanoparticles in Arabidopsis.

Manish Tiwari, Sneha Krishnamurthy, Devesh Shukla, Jeffrey Kiiskila, Ajay Jain, Rupali Datta, Nilesh Sharma, Shivendra V Sahi

Open access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Potassium Chloroaurate-MediatedNanomaterials (Basel, Switzerland) · 2022
    Article
  6. Article
  7. Dose-Dependent Physiological and Transcriptomic Responses of Lettuce (International journal of molecular sciences · 2021
    Article
  8. Article
  9. Article
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Manish TiwariDepartment of Biology, Western Kentucky University, 1906 College heights, Bowling Green, 42101-1080 Kentucky, USA.
Sneha KrishnamurthyDepartment of Biology, Western Kentucky University, 1906 College heights, Bowling Green, 42101-1080 Kentucky, USA.
Devesh ShuklaDepartment of Biology, Western Kentucky University, 1906 College heights, Bowling Green, 42101-1080 Kentucky, USA.
Jeffrey KiiskilaDepartment of Biological Sciences, Michigan Technological University, Houghton, Michigan, USA.
Ajay JainNational Research Centre on Plant Biotechnology, Lal Bahadur Shastri Building, Pusa Campus, New Delhi, 110012, India.
Rupali DattaDepartment of Biological Sciences, Michigan Technological University, Houghton, Michigan, USA.
Nilesh SharmaDepartment of Biology, Western Kentucky University, 1906 College heights, Bowling Green, 42101-1080 Kentucky, USA.
Shivendra V SahiDepartment of Biology, Western Kentucky University, 1906 College heights, Bowling Green, 42101-1080 Kentucky, USA.
Western Kentucky University · USMichigan Technological University · USNational Research Centre on Plant Biotechnology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A large number of plants have been tested and exploited in search of a green chemistry approach for the fabrication of gold or other precious metal nanomaterials. Despite the potential of plant based methods, very little is known about the underlying biochemical reactions and genes involved in the biotransformation mechanism of AuCl4 into gold nanoparticles (AuNPs). In this research, we thus focused on studying the effect of Au on growth and nanoparticles formation by analyses of transcriptome, proteome and ionome shift in Arabidopsis. Au exposure favored the growth of Arabidopsis seedling and induced formation of nanoparticles in root and shoot, as indicated by optical and hyperspectral imaging. Root transcriptome analysis demonstrated the differential expression of the members of WRKY, MYB and BHLH gene families, which are involved in the Fe and other essential metals homeostasis. The proteome analysis revealed that Glutathione S-transferases were induced in the shoot and suggested its potential role in the biosynthesis AuNPs. This study also demonstrated the role of plant hormone auxin in determining the Au induced root system architecture. This is the first study using an integrated approach to understand the in planta biotransformation of KAuCl4 into AuNPs.

Indexed as

Gene Expression Regulation, PlantTranscriptomeArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsChloridesDNA-Binding ProteinsGene Expression ProfilingGlutathione TransferaseGoldGold CompoundsGreen Chemistry TechnologyIndoleacetic AcidsMetal NanoparticlesPlant RootsPlant ShootsArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsChloridesDNA-Binding ProteinsGlutathione TransferaseGoldGold Compoundsgold tetrachloride, acidIndoleacetic AcidsMyb protein, ArabidopsisProtein IsoformsProteomeTranscription FactorsZAP1 protein, Arabidopsis

Identifiers

PMID26902325
PMCPMC4763195
OpenAlexW2413093349

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.