Evidence map›Paper›PMID 26898687›Full record

ArticleTropical animal health and production2016

Serological and molecular investigation of porcine sapovirus infection in piglets in Xinjiang, China.

Qiao Jun, Tian Lulu, Meng Qingling, Zhang Xingxing, Lu Haiting, Gong Shasha, Cheng Zibing, Cai Xuepeng, Zhang Jinsheng, Zhang Zaichao and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Tropical animal health and production, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Qiao JunCollege of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang, 832003, China.
Tian LuluCollege of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang, 832003, China.
Meng QinglingCollege of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang, 832003, China. xjmqlqj@sina.com.
Zhang XingxingCollege of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang, 832003, China.
Lu HaitingCollege of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang, 832003, China.
Gong ShashaCollege of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang, 832003, China.
Cheng ZibingCenter for Animal Disease Prevention and Control, Tacheng, Xinjiang, 834700, China.
Cai XuepengState Key Lab of Veterinary Etiological Biology, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu, 730046, China.
Zhang JinshengCenter for Animal Disease Prevention and Control, Tacheng, Xinjiang, 834700, China.
Zhang ZaichaoCenter for Animal Disease Prevention and Control, Changji, Xinjiang, 831100, China.
Cai KuojunCenter for Animal Disease Prevention and Control, Xinjiang, 830000, China.
Chen ChuangfuCollege of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang, 832003, China.
Shihezi University · CNXinjiang Uygur Autonomous Region Disease Prevention and Control Center · CNLanzhou Veterinary Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Porcine sapovirus (PoSaV) is one of the important pathogens that cause acute gastroenteritis in piglets. A survey on the infection and epidemic status of PoSaV in Xinjiang Province, Northwest China, was conducted in this study. We applied indirect viral protein 1 (VP1)-ELISA method to detect specific antibodies in 1218 serum samples of 3-month-old piglets collected from eight regions in Xinjiang during 2013-2014 and also detected PoSaV in 146 diarrhea stools of piglets in these eight regions using RT-PCR technology. The results showed that the PoSaV-serological positive rates in piglets in eight different regions in Xinjiang were between 32.82 and 47.06% with a mean rate of 37.68%. The average positive rate of PCR in stools of piglets was 3.42%. Sequencing and comparative analysis of five PCR-amplified DNA fragments revealed that four epidemic strains of PoSaV (swine/XJ-KO1, swine/XJ-AK2, swine/XJ-KS1, and swine/XJ-SHZ1) shared high nucleotide and amino acid identities with Cowden strain, while strain swine/XJ-AK1 shared higher high identities with Po/OH-JJ681/2000/US isolate. Phylogenetic clustering further verified that the epidemic strains of PoSaVs, i.e., swine/XJ-KO1, swine/XJ-AK2, swine/XJ-KS1, and swine/XJ-SHZ1, belong to genogroup (GIII) while swine/XJ-AK1 belongs to GVI. This survey confirmed for the first time that PoSaV infection was common in piglets in Xinjiang, China, and that the epidemic strains exist at least in both GIII and GVI clusters. This study provided the useful epidemiological data for scientific control and prevention of this disease.

Indexed as

Animal HusbandryAnimalsAnimals, NewbornCaliciviridae InfectionsChinaCluster AnalysisDemographyEnzyme-Linked Immunosorbent AssayFecesGastroenteritisPhylogenyPolymerase Chain ReactionSapovirusSwineSwine DiseasesChinaMolecular investigationPorcine sapovirusSerologicalXinjiang

Identifiers

PMID26898687
OpenAlexW2287306725

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.