Evidence map›Paper›PMID 26898111›Full record

ReviewNature reviews. Immunology2016

Mutations, kataegis and translocations in B cells: understanding AID promiscuous activity.

Rafael Casellas, Uttiya Basu, William T Yewdell, Jayanta Chaudhuri, Davide F Robbiani, Javier M Di Noia

Open access · greenAbstract readReview
In one paragraph

Review in Nature reviews. Immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed
11.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed, 182 citations in OpenAlex.

  1. Trial
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  14. B-Cell Epigenetic Modulation of IgA Response by 5-Azacytidine and IgA Nephropathy.Journal of the American Society of Nephrology : JASN · 2024
    Article
  15. Article
  16. Article
  17. Childhood B cell leukemia: Intercepting the paths to progression.BioEssays : news and reviews in molecular, cellular and developmental biology · 2024
    Review
  18. Review
  19. Article
  20. Article

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 6 institutions in 2 countries.

Rafael CasellasGenomics and Immunity, National Institute of Arthritis and Musculoskeletal and Skin Diseases-National Cancer Institute (NIAMS-NCI), National Institutes of Health, Bethesda, Maryland 20892, USA.
Uttiya BasuDepartment of Microbiology and Immunology, College of Physicians and Surgeons, Columbia University, New York, New York 10032, USA.
William T YewdellImmunology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
Jayanta ChaudhuriImmunology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065, USA.
Davide F RobbianiLaboratory of Molecular Immunology, The Rockefeller University, New York, New York 10065, USA.
Javier M Di NoiaInstitut de Recherches Cliniques de Montréal, H2W 1R7 Montréal, Québec, Canada.
Columbia University · USCornell University · USMemorial Sloan Kettering Cancer Center · USMontreal Clinical Research Institute · CANational Institute of Arthritis and Musculoskeletal and Skin Diseases · USRockefeller University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
RAG and AID biologyZIAAR041148 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI O'SHEA, JOHN · 2009 to 2025
$44.8M
IMMUNOLOGY RESEARCH TRAININGT32CA009149 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI RUDENSKY, ALEXANDER Y · 1985 to 2022
$4.0M
Chromosome fragility and translocations in lymphocytesR21AI112602 · NIAID · ROCKEFELLER UNIVERSITY · PI ROBBIANI, DAVIDE FILIPPO · 2015 to 2016
$466k
NCI NIH HHS P30 CA008748NCI NIH HHS T32 CA009149NIAID NIH HHS R21 AI112602
6 · The paper itself

Abstract

As B cells engage in the immune response, they express activation-induced cytidine deaminase (AID) to initiate the hypermutation and recombination of immunoglobulin genes, which are crucial processes for the efficient recognition and disposal of pathogens. However, AID must be tightly controlled in B cells to minimize off-target mutations, which can drive chromosomal translocations and the development of B cell malignancies, such as lymphomas. Recent genomic and biochemical analyses have begun to unravel the mechanisms of how AID-mediated deamination is targeted outside immunoglobulin genes. Here, we discuss the transcriptional and topological features that are emerging as key drivers of AID promiscuous activity.

Indexed as

MutationAICDA (Activation-Induced Cytidine Deaminase)AnimalsB-LymphocytesCytidine DeaminaseHumansImmunoglobulin Class SwitchingLymphoma, B-CellSomatic Hypermutation, ImmunoglobulinTranslocation, GeneticAICDA (Activation-Induced Cytidine Deaminase)Cytidine Deaminase

Identifiers

PMID26898111
PMCPMC4871114
OpenAlexW2277606729

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.