Evidence map›Paper›PMID 26896443›Full record

ArticleThe EMBO journal2016

Starting too soon: upstream reading frames repress downstream translation.

Anna M McGeachy, Nicholas T Ingolia

Open access · bronzeAbstract readComment
In one paragraph

Article in The EMBO journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Anna M McGeachyProgram in Cell, Molecular, Developmental Biology, and Biophysics, Johns Hopkins University, Baltimore, MD, USA Department of Molecular and Cell Biology, Center for RNA Systems Biology, California Institute for Quantitative Biomedical Sciences University of California Berkeley, Berkeley, CA, USA.
Nicholas T IngoliaDepartment of Molecular and Cell Biology, Center for RNA Systems Biology, California Institute for Quantitative Biomedical Sciences University of California Berkeley, Berkeley, CA, USA.
QB3 · USUniversity of California, Berkeley · US

Funding

Molecular Basis and Cellular Roles of Translational RegulationDP2CA195768 · NCI · UNIVERSITY OF CALIFORNIA BERKELEY · PI INGOLIA, NICHOLAS T · 2014 to 2014
$2.4M
NCI NIH HHS DP2 CA195768
6 · The paper itself

Abstract

Upstream open reading frames (uORFs) are known to regulate a few specific transcripts, and recent computational and experimental studies have suggested candidate uORF regulation across the genome. In this issue, Johnstone et al (2016) use ribosome profiling to identify translated uORFs and measure their effects on downstream translation. Furthermore, they show that regulatory uORFs are conserved across species and subject to selective constraint. Recognizing the potential of uORFs in regulating translation expands our understanding of the dynamic regulation of gene expression.

Indexed as

Open Reading FramesProtein BiosynthesisAnimalsRepressor ProteinsVertebratesRepressor Proteins

Identifiers

PMID26896443
PMCPMC4818767
OpenAlexW2288126248

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.