Evidence map›Paper›PMID 26896396›Full record

ArticlePlant physiology2016

Lipid Droplet-Associated Proteins (LDAPs) Are Required for the Dynamic Regulation of Neutral Lipid Compartmentation in Plant Cells.

Satinder K Gidda, Sunjung Park, Michal Pyc, Olga Yurchenko, Yingqi Cai, Peng Wu, David W Andrews, Kent D Chapman, John M Dyer, Robert T Mullen

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
14.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 192 citations in OpenAlex.

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32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Satinder K GiddaDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.).ORCID 0000-0002-4722-0006
Sunjung ParkDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.).
Michal PycDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.).ORCID 0000-0001-8702-1661
Olga YurchenkoDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.).ORCID 0000-0002-8628-7190
Yingqi CaiDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.).ORCID 0000-0002-0357-5809
Peng WuDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.).
David W AndrewsDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.).ORCID 0000-0002-9266-7157
Kent D ChapmanDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.).ORCID 0000-0003-0489-3072
John M DyerDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.) john.dyer@ars.usda.gov rtmullen@uoguelph.ca.ORCID 0000-0001-6215-0053
Robert T MullenDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada N1G 2W1 (S.K.G., M.P., R.T.M.);United States Department of Agriculture, Agricultural Research Service, United States Arid-Land Agricultural Research Center, Maricopa, Arizona 85138 (S.P., O.Y., J.M.D.);Department of Biological Sciences, Center for Plant Lipid Research, University of North Texas, Denton, Texas 76203 (Y.C., K.D.C.); andSunnybrook Research Institute and Department of Biochemistry, University of Toronto, Toronto, Ontario, Canada M4N 3M5 (P.W., D.W.A.) john.dyer@ars.usda.gov rtmullen@uoguelph.ca.ORCID 0000-0002-6915-7407
University of North Texas · USUniversity of Guelph · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eukaryotic cells compartmentalize neutral lipids into organelles called lipid droplets (LDs), and while much is known about the role of LDs in storing triacylglycerols in seeds, their biogenesis and function in nonseed tissues are poorly understood. Recently, we identified a class of plant-specific, lipid droplet-associated proteins (LDAPs) that are abundant components of LDs in nonseed cell types. Here, we characterized the three LDAPs in Arabidopsis (Arabidopsis thaliana) to gain insight to their targeting, assembly, and influence on LD function and dynamics. While all three LDAPs targeted specifically to the LD surface, truncation analysis of LDAP3 revealed that essentially the entire protein was required for LD localization. The association of LDAP3 with LDs was detergent sensitive, but the protein bound with similar affinity to synthetic liposomes of various phospholipid compositions, suggesting that other factors contributed to targeting specificity. Investigation of LD dynamics in leaves revealed that LD abundance was modulated during the diurnal cycle, and characterization of LDAP misexpression mutants indicated that all three LDAPs were important for this process. LD abundance was increased significantly during abiotic stress, and characterization of mutant lines revealed that LDAP1 and LDAP3 were required for the proper induction of LDs during heat and cold temperature stress, respectively. Furthermore, LDAP1 was required for proper neutral lipid compartmentalization and triacylglycerol degradation during postgerminative growth. Taken together, these studies reveal that LDAPs are required for the maintenance and regulation of LDs in plant cells and perform nonredundant functions in various physiological contexts, including stress response and postgerminative growth.

Indexed as

Cell CompartmentationAmino Acid SequenceArabidopsisArabidopsis ProteinsCircadian RhythmGenes, PlantLipid Droplet Associated ProteinsLipid DropletsLipidsLiposomesPhospholipidsPlant CellsPlant DormancyPlant LeavesPlants, Genetically ModifiedProtein BindingArabidopsis ProteinsLipid Droplet Associated ProteinsLipidsLiposomesPhospholipids

Identifiers

PMID26896396
PMCPMC4825156
OpenAlexW2281947883

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.