Evidence map›Paper›PMID 26895630›Full record

ArticleJournal of experimental botany2016

PME58 plays a role in pectin distribution during seed coat mucilage extrusion through homogalacturonan modification.

Amélie Turbant, Françoise Fournet, Michelle Lequart, Luciane Zabijak, Karine Pageau, Sophie Bouton, Olivier Van Wuytswinkel

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 59 citations in OpenAlex.

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  15. Frontiers in plant science · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Amélie TurbantUnité Biologie des Plantes et Innovation (BIOPI) EA3900, Université de Picardie Jules Verne, 80039 Amiens, France.
Françoise FournetUnité Biologie des Plantes et Innovation (BIOPI) EA3900, Université de Picardie Jules Verne, 80039 Amiens, France.
Michelle LequartUnité Biologie des Plantes et Innovation (BIOPI) EA3900, Université de Picardie Jules Verne, 80039 Amiens, France.
Luciane ZabijakPlateforme d'Ingénierie Cellulaire et Analyses des Protéines, Université de Picardie Jules Verne, 80036 Amiens, France.
Karine PageauUnité Biologie des Plantes et Innovation (BIOPI) EA3900, Université de Picardie Jules Verne, 80039 Amiens, France.
Sophie BoutonUnité Biologie des Plantes et Innovation (BIOPI) EA3900, Université de Picardie Jules Verne, 80039 Amiens, France.
Olivier Van WuytswinkelUnité Biologie des Plantes et Innovation (BIOPI) EA3900, Université de Picardie Jules Verne, 80039 Amiens, France ovw@u-picardie.fr.ORCID http://orcid.org/0000-0002-3238-9845
Biologie des Plantes et Innovation · FRUniversité de Picardie Jules Verne · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pectins are major components of plant primary cell walls. They include homogalacturonans (HGs), which are the most abundant pectin and can be the target of apoplastic enzymes like pectin methylesterases (PMEs) that control their methylesterification level. Several PMEs are expressed in the seed coat of Arabidopsis thaliana, particularly in mucilage secretory cells (MSCs). On the basis of public transcriptomic data, seven PME genes were selected and checked for their seed-specific expression by quantitative reverse transcription PCR. Of these, PME58 presented the highest level of expression and was specifically expressed in MSCs at the early stages of seed development. pme58 mutants presented two discrete phenotypes: (i) their adherent mucilage was less stained by ruthenium red when compared to wild-type seeds, but only in the presence of EDTA, a Ca(2+)chelator; and (ii) the MSC surface area was decreased. These phenotypes are the consequence of an increase in the degree of HG methylesterification connected to a decrease in PME activity. Analysis of the sugar composition of soluble and adherent mucilage showed that, in the presence of EDTA, sugars of adherent mucilage were more readily extracted in pme58 mutants. Immunolabelling with LM19, an antibody that preferentially recognizes unesterified HGs, also showed that molecular interactions with HGs were modified in the adherent mucilage of pme58 mutants, suggesting a role of PME58 in mucilage structure and organization. In conclusion, PME58 is the first PME identified to play a direct role in seed mucilage structure.

Indexed as

ArabidopsisArabidopsis ProteinsCarboxylic Ester HydrolasesDNA, BacterialEsterificationGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantMutagenesis, InsertionalMutationPectinsPhenotypePlant MucilagePromoter Regions, GeneticSeedsArabidopsis ProteinsCarboxylic Ester HydrolasesDNA, BacterialpectinesterasePectinsPlant Mucilagepolygalacturonic acidT-DNAArabidopsishomogalacturonansimmunolabelingmucilagepectin methylesterasepectinsseed coat.

Identifiers

PMID26895630
PMCPMC4809284
OpenAlexW2286081421

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.