Evidence map›Paper›PMID 26894927›Full record

ArticlePloS one2016

Deltex1 Polymorphisms Are Associated with Hepatitis B Vaccination Non-Response in Southwest China.

Bin Xie, Penghui Zhang, Menggang Liu, Wei Zeng, Juntao Yang, Hongming Liu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 11 citations in OpenAlex.

  1. Observational
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  4. Vaccinomics and adversomics: key elements for a personalized vaccinology.Clinical and experimental vaccine research · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Bin XieDepartment of Hepatobiliary Surgery, Daping Hospital & Institute of Surgery Research, Third Military Medical University, Chongqing, China.
Penghui ZhangDepartment of Clinical Laboratory Medicine, Children's Hospital of Chongqing Medical University, Chongqing, China.
Menggang LiuDepartment of Hepatobiliary Surgery, Daping Hospital & Institute of Surgery Research, Third Military Medical University, Chongqing, China.
Wei ZengDepartment of Hepatobiliary Surgery, Daping Hospital & Institute of Surgery Research, Third Military Medical University, Chongqing, China.
Juntao YangDepartment of Hepatobiliary Surgery, Daping Hospital & Institute of Surgery Research, Third Military Medical University, Chongqing, China.
Hongming LiuDepartment of Hepatobiliary Surgery, Daping Hospital & Institute of Surgery Research, Third Military Medical University, Chongqing, China.
Army Medical University · CNChildren's Hospital of Chongqing Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatitis B vaccination is the most important tool available for preventing hepatitis B virus (HBV) infection and reducing the prevalence of infection. However, epidemiological studies have demonstrated that morethan 5% of patients exhibit a non- or hypo-response to the HBV vaccine. Genetic variations associated with T cell immunity contribute to the immune response to HBV vaccination. The deltex 1 (DTX1) gene is involved in T cell anergy, which may also be associated with the immune response to the HBV vaccination.

methodsWe detected 10 single nucleotide polymorphisms (SNPs) in or around the DTX1 gene in 601 infants out of a population from Southwest China, including 299 high responders(HRs; HBsAb > 100 mIU/mL) and 302 non-responders (NRs; HBsAb < 10 mIU/mL). An additional validation study was performed, comprising 230 adult patients(135 HRs and 95 NRs) from Southwest China.

resultsThis study found that the minor allele 'G' of rs2384077 (adjusted p = 2.63E(-04)), and the minor allele 'C' of rs10744794 (adjusted p = 3.69E(-04)) in the first intron of the DTX1 gene were remarkably associated with the immune response to HBV vaccination in both infant and adult populations. Moreover, a subsequent analysis indicated that haplotypes (A-T, G-C) of the two SNPs were significantly associated with the immune response to HBV vaccination.

conclusionsTwo SNPs (rs2384077 and rs10744794) in an intron of DTX1 and the linkage disequilibrium (LD) block are significantly associated with the immune response to HBV vaccination. The functional element annotation of the LD block between the two SNPs contains four transcriptional regulatory elements. The results suggest that these two SNPs may be involved in the immune response to HBV vaccination.

Indexed as

Polymorphism, Single NucleotideAdultAllelesChild, PreschoolChinaComputational BiologyFemaleGene FrequencyGenotypeHaplotypesHepatitis BHepatitis B VaccinesHepatitis B virusHumansInfantLinkage DisequilibriumDTX1 protein, humanHepatitis B VaccinesUbiquitin-Protein Ligases

Identifiers

PMID26894927
PMCPMC4760674
OpenAlexW2274847750

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.