Evidence map›Paper›PMID 26894406›Full record

ArticleBiochemistry2016

Binding of Crumbs to the Par-6 CRIB-PDZ Module Is Regulated by Cdc42.

Dustin S Whitney, Francis C Peterson, Aaron W Kittell, John M Egner, Kenneth E Prehoda, Brian F Volkman

Erratum issuedAbstract read
In one paragraph

Article in Biochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. LGL-1 and the RhoGAP protein PAC-1 redundantly polarize thebioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. A PAR6-aPKC-LGL structure reveals how LGL antagonizes aPKC.Nature structural & molecular biology · 2025
    Article
  4. Article
  5. A PDZ-kinase allosteric relay mediates Par complex regulator exchange.bioRxiv : the preprint server for biology · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Mechanoregulation of PDZ Proteins, An Emerging Function.Methods in molecular biology (Clifton, N.J.) · 2021
    Review
  13. Article
  14. Research Models and Gene Augmentation Therapy forFrontiers in neuroscience · 2020
    Review
  15. Review
  16. Structural Features of Tight-Junction Proteins.International journal of molecular sciences · 2019
    Review
  17. Article
  18. Emerging Themes in PDZ Domain Signaling: Structure, Function, and Inhibition.International review of cell and molecular biology · 2019
    Review
  19. Regulation of Cell Polarity by Exocyst-Mediated Trafficking.Cold Spring Harbor perspectives in biology · 2018
    Review
  20. The Crumbs3 Polarity Protein.Cold Spring Harbor perspectives in biology · 2018
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Dustin S WhitneyDepartment of Biochemistry, Medical College of Wisconsin , Milwaukee, Wisconsin 53226, United States.
Francis C PetersonDepartment of Biochemistry, Medical College of Wisconsin , Milwaukee, Wisconsin 53226, United States.
Aaron W KittellDepartment of Biochemistry, Medical College of Wisconsin , Milwaukee, Wisconsin 53226, United States.
John M EgnerDepartment of Biochemistry, Medical College of Wisconsin , Milwaukee, Wisconsin 53226, United States.
Kenneth E PrehodaDepartment of Chemistry and Biochemistry and Institute for Molecular Biology, University of Oregon , Eugene, Oregon 97403, United States.
Brian F VolkmanDepartment of Biochemistry, Medical College of Wisconsin , Milwaukee, Wisconsin 53226, United States.

Funding

Protein Interactions That Regulate Cell PolarityR01GM068032 · NIGMS · UNIVERSITY OF OREGON · PI PREHODA, KENNETH E · 2003 to 2016
$4.1M
Structural Basis for Chemokine FunctionR01AI058072 · NIAID · MEDICAL COLLEGE OF WISCONSIN · PI VOLKMAN, BRIAN F · 2004 to 2019
$4.1M
Structural Basis for Chemokine FunctionR37AI058072 · NIAID · MEDICAL COLLEGE OF WISCONSIN · PI Brian F Volkman · 2020 to 2026
$2.8M
NIAID NIH HHS AI058072NIAID NIH HHS R01 AI058072NIAID NIH HHS R37 AI058072NIGMS NIH HHS GM068032RO1NIGMS NIH HHS R01 GM068032
6 · The paper itself

Abstract

Par-6 is a scaffold protein that organizes other proteins into a complex required to initiate and maintain cell polarity. Cdc42-GTP binds the CRIB module of Par-6 and alters the binding affinity of the adjoining PDZ domain. Allosteric regulation of the Par-6 PDZ domain was first demonstrated using a peptide identified in a screen of typical carboxyl-terminal ligands. Crumbs, a membrane protein that localizes a conserved polarity complex, was subsequently identified as a functional partner for Par-6 that likely interacts with the PDZ domain. Here we show by nuclear magnetic resonance that Par-6 binds a Crumbs carboxyl-terminal peptide and report the crystal structure of the PDZ-peptide complex. The Crumbs peptide binds Par-6 more tightly than the previously studied carboxyl peptide ligand and interacts with the CRIB-PDZ module in a Cdc42-dependent manner. The Crumbs:Par-6 crystal structure reveals specific PDZ-peptide contacts that contribute to its higher affinity and Cdc42-enhanced binding. Comparisons with existing structures suggest that multiple C-terminal Par-6 ligands respond to a common conformational switch that transmits the allosteric effects of GTPase binding.

Indexed as

AnimalsCrystallography, X-RayDrosophila melanogasterDrosophila ProteinsGTP-Binding ProteinsMembrane ProteinsPDZ DomainsProtein BindingProtein Kinase CProtein Structure, SecondaryProtein Structure, TertiaryCdc42 protein, Drosophilacrb protein, DrosophilaDrosophila ProteinsGTP-Binding ProteinsMembrane ProteinsPar-6 protein, DrosophilaProtein Kinase C

Identifiers

PMID26894406
PMCPMC5433836

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.