Evidence map›Paper›PMID 26893611›Full record

ArticleBiotechnology for biofuels2016

Anoxic metabolism and biochemical production in Pseudomonas putida F1 driven by a bioelectrochemical system.

Bin Lai, Shiqin Yu, Paul V Bernhardt, Korneel Rabaey, Bernardino Virdis, Jens O Krömer

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 115 citations in OpenAlex.

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  16. Micro-aerobic production of isobutanol with engineeredEngineering in life sciences · 2021
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  19. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Bin LaiCentre for Microbial Electrochemical Systems (CEMES), The University of Queensland, Office 618, Gehrmann Building (60), St. Lucia, Brisbane, QLD 4072 Australia ; Advanced Water Management Centre (AWMC), The University of Queensland, Brisbane, Australia.
Shiqin YuCentre for Microbial Electrochemical Systems (CEMES), The University of Queensland, Office 618, Gehrmann Building (60), St. Lucia, Brisbane, QLD 4072 Australia ; Advanced Water Management Centre (AWMC), The University of Queensland, Brisbane, Australia.
Paul V BernhardtSchool of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.
Korneel RabaeyLaboratory of Microbial Ecology and Technology (LabMET), Ghent University, Ghent, Belgium.
Bernardino VirdisCentre for Microbial Electrochemical Systems (CEMES), The University of Queensland, Office 618, Gehrmann Building (60), St. Lucia, Brisbane, QLD 4072 Australia ; Advanced Water Management Centre (AWMC), The University of Queensland, Brisbane, Australia.
Jens O KrömerCentre for Microbial Electrochemical Systems (CEMES), The University of Queensland, Office 618, Gehrmann Building (60), St. Lucia, Brisbane, QLD 4072 Australia ; Advanced Water Management Centre (AWMC), The University of Queensland, Brisbane, Australia.ORCID 0000-0001-5006-0819
The University of Queensland · AUGhent University · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPseudomonas putida is a promising host for the bioproduction of chemicals, but its industrial applications are significantly limited by its obligate aerobic character. The aim of this paper is to empower the anoxic metabolism of wild-type Pseudomonas putida to enable bioproduction anaerobically, with the redox power from a bioelectrochemical system (BES).

resultsThe obligate aerobe Pseudomonas putida F1 was able to survive and produce almost exclusively 2-Keto-gluconate from glucose under anoxic conditions due to redox balancing with electron mediators in a BES. 2-Keto-gluconate, a precursor for industrial anti-oxidant production, was produced at an overall carbon yield of over 90 % based on glucose. Seven different mediator compounds were tested, and only those with redox potential above 0.207 V (vs standard hydrogen electrode) showed interaction with the cells. The productivity increased with the increasing redox potential of the mediator, indicating this was a key factor affecting the anoxic production process. P. putida cells survived under anaerobic conditions, and limited biofilm formation could be observed on the anode's surface. Analysis of the intracellular pools of ATP, ADP and AMP showed that cells had an increased adenylate energy charge suggesting that cells were able to generate energy using the anode as terminal electron acceptor. The analysis of NAD(H) and NADP(H) showed that in the presence of specific extracellular electron acceptors, the NADP(H) pool was more oxidised, while the NAD(H) pool was unchanged. This implies a growth limitation under anaerobic conditions due to a shortage of NADPH and provides a way to limit biomass formation, while allowing cell maintenance and catalysis at high purity and yield.

conclusionsFor the first time, this study proved the principle that a BES-driven bioconversion of glucose can be achieved for a wild-type obligate aerobe. This non-growth bioconversion was in high yields, high purity and also could deliver the necessary metabolic energy for cell maintenance. By combining this approach with metabolic engineering strategies, this could prove to be a powerful new way to produce bio-chemicals and fuels from renewables in both high yield and high purity.

Indexed as

Anoxic metabolismBioelectrochemical systemBio-productionChemical feedstocksExtracellular electron transferPseudomonas putida F1Redox mediators

Identifiers

PMID26893611
PMCPMC4758010
OpenAlexW2276620228

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.