Evidence map›Paper›PMID 26893365›Full record

ArticleOncotarget2016

A genetic variation in microRNA target site of ETS2 is associated with clinical outcomes of paclitaxel-cisplatin chemotherapy in non-small cell lung cancer.

Mi Jeong Hong, Shin Yup Lee, Jin Eun Choi, Cheng Cheng Jin, Hyo Jung Kang, Sun Ah Baek, So Yeon Lee, Kyung Min Shin, Ji Yun Jeong, Won Kee Lee and 6 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Mi Jeong HongDepartments of Biochemistry and Cell Biology, Kyungpook National University Medical Center, Daegu, Republic of Korea.
Shin Yup LeeDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Republic of Korea.
Jin Eun ChoiDepartments of Biochemistry and Cell Biology, Kyungpook National University Medical Center, Daegu, Republic of Korea.
Cheng Cheng JinDepartments of Biochemistry and Cell Biology, Kyungpook National University Medical Center, Daegu, Republic of Korea.
Hyo Jung KangDepartments of Biochemistry and Cell Biology, Kyungpook National University Medical Center, Daegu, Republic of Korea.
Sun Ah BaekDepartments of Biochemistry and Cell Biology, Kyungpook National University Medical Center, Daegu, Republic of Korea.
So Yeon LeeLung Cancer Center, Kyungpook National University Medical Center, Daegu, Republic of Korea.
Kyung Min ShinDepartment of Radiology, Kyungpook National University Medical Center, Daegu, Republic of Korea.
Ji Yun JeongDepartment of Pathology, Kyungpook National University Medical Center, Daegu, Republic of Korea.
Won Kee LeeBiostatistics Center, School of Medicine, Kyungpook National University, Daegu, Republic of Korea.
Seung Soo YooDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Republic of Korea.
Jaehee LeeDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Republic of Korea.
Seung Ick ChaDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Republic of Korea.
Chang Ho KimDepartment of Internal Medicine, School of Medicine, Kyungpook National University, Daegu, Republic of Korea.
Ji Woong SonDepartment of Internal Medicine, Konyang University Hospital, Daejeon, Republic of Korea.
Jae Yong ParkDepartments of Biochemistry and Cell Biology, Kyungpook National University Medical Center, Daegu, Republic of Korea.
Kyungpook National University Medical Center · KRKyungpook National University · KRKonyang University Hospital · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study was performed to investigate the association of single nucleotide polymorphisms (SNPs) located in the miRNA target sites with the clinical outcomes of first line paclitaxel-cisplatin chemotherapy in advanced NSCLC. Eighty SNPs in miRNA binding sites of cancer related genes selected from 18,500 miRNA:target bindings in crosslinking, ligation, and sequencing of hybrids (CLASH) data were investigated in 379 advanced NSCLC patients using a sequenom mass spectrometry-based genotype assay. qRT-PCR and luciferase assay were conducted to examine functional relevance of potentially functional SNPs in miRNA binding sites. Of the 80 SNPs analyzed, 16 SNPs were significantly associated with the clinical outcomes after chemotherapy. Among these, ANAPC1 rs3814026C>T, ETS2 rs461155A>G, SORBS1 rs7081076C>A and POLR2A rs2071504C>T could predict both chemotherapy response and survival. Notably, ETS2 rs461155A>G was significantly associated with decreased ETS2 mRNA expression in both tumor and paired normal lung tissues (Ptrend = 4 × 10-7, and 3 × 10-4, respectively). Consistently, a decreased expression of the reporter gene for the G allele of rs461155 compared with the A allele was observed by luciferase assay. These findings suggest that the four SNPs, especially ETS2 rs461155A>G, could be used as biomarkers predicting the clinical outcomes of NSCLC patients treated with first-line paclitaxel-cisplatin chemotherapy.

Indexed as

AdultAgedAntineoplastic Combined Chemotherapy ProtocolsBinding SitesBiomarkers, TumorCarcinoma, Non-Small-Cell LungCisplatinFemaleGene Expression Regulation, NeoplasticGenotypeHumansKaplan-Meier EstimateLung NeoplasmsMaleMicroRNAsMiddle AgedBiomarkers, TumorCisplatinETS2 protein, humanMicroRNAsMIRN149 microRNA, humanPaclitaxelProto-Oncogene Protein c-ets-2chemotherapymiRNA target sitesnon-small cell lung cancerpolymorphismsresponse

Identifiers

PMID26893365
PMCPMC4941289
OpenAlexW2290213112

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.