Evidence map›Paper›PMID 26892493›Full record

ArticleScientific reports2016

Identification of novel secreted fatty acids that regulate nitrogen catabolite repression in fission yeast.

Xiaoying Sun, Go Hirai, Masashi Ueki, Hiroshi Hirota, Qianqian Wang, Yayoi Hongo, Takemichi Nakamura, Yuki Hitora, Hidekazu Takahashi, Mikiko Sodeoka and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Xiaoying SunChemical Genetics Laboratory, RIKEN, Saitama, Japan.
Go HiraiSynthetic Organic Chemistry Laboratory, RIKEN, Saitama, Japan.
Masashi UekiChemical Biology Research Group, RIKEN CSRS, Saitama, Japan.
Hiroshi HirotaChemical Genomics Research Group, RIKEN CSRS, Saitama, Japan.
Qianqian WangCatalysis and Integrated Research Group, RIKEN CSRS, Saitama, Japan.
Yayoi HongoMolecular Structure Characterization Unit, Technology Platform Division, RIKEN CSRS, Saitama, Japan.
Takemichi NakamuraMolecular Structure Characterization Unit, Technology Platform Division, RIKEN CSRS, Saitama, Japan.
Yuki HitoraChemical Genetics Laboratory, RIKEN, Saitama, Japan.
Hidekazu TakahashiDepartment of Public Health, Yamaguchi University Graduate School of Medicine, Yamaguchi, Japan.
Mikiko SodeokaSynthetic Organic Chemistry Laboratory, RIKEN, Saitama, Japan.
Hiroyuki OsadaChemical Biology Research Group, RIKEN CSRS, Saitama, Japan.
Makiko HamamotoDepartment of Life Sciences, Graduate School of Agriculture, Meiji University, Kanagawa, Japan.
Minoru YoshidaChemical Genetics Laboratory, RIKEN, Saitama, Japan.
Yoko YashirodaChemical Genetics Laboratory, RIKEN, Saitama, Japan.
RIKEN · JPMeiji University · JPYamaguchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Uptake of poor nitrogen sources such as branched-chain amino acids is repressed in the presence of high-quality nitrogen sources such as NH4(+) and glutamate (Glu), which is called nitrogen catabolite repression. Amino acid auxotrophic mutants of the fission yeast Schizosaccharomyces pombe were unable to grow on minimal medium containing NH4Cl or Glu even when adequate amounts of required amino acids were supplied. However, growth of these mutant cells was recovered in the vicinity of colonies of the prototrophic strain, suggesting that the prototrophic cells secrete some substances that can restore uptake of amino acids by an unknown mechanism. We identified the novel fatty acids, 10(R)-acetoxy-8(Z)-octadecenoic acid and 10(R)-hydroxy-8(Z)-octadecenoic acid, as secreted active substances, referred to as Nitrogen Signaling Factors (NSFs). Synthetic NSFs were also able to shift nitrogen source utilization from high-quality to poor nitrogen sources to allow adaptive growth of the fission yeast amino acid auxotrophic mutants in the presence of high-quality nitrogen sources. Finally, we demonstrated that the Agp3 amino acid transporter was involved in the adaptive growth. The data highlight a novel intra-species communication system for adaptation to environmental nutritional conditions in fission yeast.

Indexed as

Catabolite RepressionAdaptation, BiologicalAmino AcidsAmino Acid Transport SystemsBiological TransportFatty AcidsMetabolomicsMutationNitrogenSchizosaccharomycesAmino AcidsAmino Acid Transport SystemsFatty AcidsNitrogen

Identifiers

PMID26892493
PMCPMC4759587
OpenAlexW2417820415

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.