Evidence map›Paper›PMID 26890252›Full record

ArticlePloS one2016

SETD7 Regulates the Differentiation of Human Embryonic Stem Cells.

Julio Castaño, Cristina Morera, Borja Sesé, Stephanie Boue, Carles Bonet-Costa, Merce Martí, Alicia Roque, Albert Jordan, Maria J Barrero

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
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  3. iScience · 2023
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  15. Deciphering the Epigenetic Code in Embryonic and Dental Pulp Stem Cells.The Yale journal of biology and medicine · 2016
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Julio CastañoCenter for Regenerative Medicine in Barcelona, (CMRB), Barcelona, 08003, Spain.
Cristina MoreraCenter for Regenerative Medicine in Barcelona, (CMRB), Barcelona, 08003, Spain.
Borja SeséCenter for Regenerative Medicine in Barcelona, (CMRB), Barcelona, 08003, Spain.
Stephanie BoueCenter for Regenerative Medicine in Barcelona, (CMRB), Barcelona, 08003, Spain.
Carles Bonet-CostaInstitut de Biologia Molecular de Barcelona (IBMB-CSIC), Barcelona, 08028, Spain.
Merce MartíCenter for Regenerative Medicine in Barcelona, (CMRB), Barcelona, 08003, Spain.
Alicia RoqueInstitut de Biologia Molecular de Barcelona (IBMB-CSIC), Barcelona, 08028, Spain.
Albert JordanInstitut de Biologia Molecular de Barcelona (IBMB-CSIC), Barcelona, 08028, Spain.
Maria J BarreroCenter for Regenerative Medicine in Barcelona, (CMRB), Barcelona, 08003, Spain.
Center of Regenerative Medicine in Barcelona · ESInstitut de Biologia Molecular de Barcelona · ESCentro de Investigación del Cáncer · ESUniversitat Autònoma de Barcelona · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The successful use of specialized cells in regenerative medicine requires an optimization in the differentiation protocols that are currently used. Understanding the molecular events that take place during the differentiation of human pluripotent cells is essential for the improvement of these protocols and the generation of high quality differentiated cells. In an effort to understand the molecular mechanisms that govern differentiation we identify the methyltransferase SETD7 as highly induced during the differentiation of human embryonic stem cells and differentially expressed between induced pluripotent cells and somatic cells. Knock-down of SETD7 causes differentiation defects in human embryonic stem cell including delay in both the silencing of pluripotency-related genes and the induction of differentiation genes. We show that SETD7 methylates linker histone H1 in vitro causing conformational changes in H1. These effects correlate with a decrease in the recruitment of H1 to the pluripotency genes OCT4 and NANOG during differentiation in the SETD7 knock down that might affect the proper silencing of these genes during differentiation.

Indexed as

Carrier ProteinsCell CycleCell DifferentiationCell Line, TumorChromatinGene Expression Regulation, DevelopmentalGene Knockdown TechniquesGene SilencingHistone-Lysine N-MethyltransferaseHistonesHuman Embryonic Stem CellsHumansMethylationProtein BindingProtein Interaction MappingCarrier ProteinsChromatinHistone-Lysine N-MethyltransferaseHistonesSETD7 protein, human

Identifiers

PMID26890252
PMCPMC4758617
OpenAlexW2281185882

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.