Evidence map›Paper›PMID 26889377›Full record

ArticleCell & bioscience2016

Universal minicircle sequence binding protein of Leishmania donovani regulates pathogenicity by controlling expression of cytochrome-b.

Ruby Singh, Bidyut Purkait, Kumar Abhishek, Savita Saini, Sushmita Das, Sudha Verma, Abhishek Mandal, Ayan Kr Ghosh, Yousuf Ansari, Ashish Kumar and 4 more

RetractedOpen access · goldAbstract readRetracted Publication
In one paragraph

Article in Cell & bioscience, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. The Complete Mitochondrial DNA ofFrontiers in cellular and infection microbiology · 2021
    Article
  4. Review
  5. Redox Balance Keepers and Possible Cell Functions Managed by Redox Homeostasis inFrontiers in cellular and infection microbiology · 2019
    Review
  6. Article
  7. Article
  8. Frontiers in immunology · 2018
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Ruby SinghDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Bidyut PurkaitDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Kumar AbhishekDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Savita SainiDepartment of Biotechnology, National Institute of Pharmaceutical Education and Research (NIPER), Hajipur, Vaishali, Bihar 844101 India.
Sushmita DasDepartment of Microbiology, All India Institute of Medical Sciences (AIIMS), Patna, 801105 India.
Sudha VermaDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Abhishek MandalDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Ayan Kr GhoshDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Yousuf AnsariDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Ashish KumarDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Abul H SardarDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Ajay KumarDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Pradeep ParrackDepartment of Biochemistry, Bose Institute, Kolkata, 700009 India.
Pradeep DasDepartment of Molecular Parasitology and Bioinformatics, Rajendra Memorial Research Institute of Medical Sciences (RMRIMS), Indian Council of Medical Research (ICMR), Agamkuan, Patna, Bihar 800007 India.
Rajendra Memorial Research Institute of Medical Sciences · INAll India Institute of Medical Sciences · INBose Institute · INNational Institute of Pharmaceutical Education and Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLeishmania contains a concatenated mitochondrial DNA, kDNA. Universal minicircle sequence binding protein (UMSBP), a mitochondrial protein, initiates kDNA replication by binding with a conserved universal minicircle sequence (UMS) of kDNA. Here, we describe first time in L. donovani the regulation of DNA binding activity of UMSBP and the role of UMSBP in virulence.

methodsInsilco and EMSA study were performed to show UMS-binding activity of UMSBP. Tryparedoxin(TXN)-tryparedoxin peroxidase(TXNPx) assay as well as co-overexpression of cytochrome-b5 reductase-like protein (CBRL) and tryparedoxin in L. donovani were done to know the regulation of DNA binding activity of UMSBP. Knockout and episomal-expression constructs of UMSBP were transfected in L. donovani. The cell viability assay and immunofluorescence study to know the status of kDNA were performed. Macrophages were infected with transfected parasites. mRNA level of cytochrome b, activity of complex-III, intracellular ATP level of both transfected promastigotes and amastigotes as well as ROS concentration and the level of apoptosis of transfected promastigotes were measured. Level of oxidative phosphorylation of both transfected and un-transfected amastigotes were compared. Burden of transfected amastigotes in both macrophages and BALB/c mice were measured.

resultsL. donovani UMSBP is capable of binding with UMS, regulated by redox through mitochondrial enzymes, TXN, TXNPx and CBRL. Depletion of UMSBP (LdU(-/-)) caused kDNA loss, which decreased cytochrome-b expression [component of complex-III of electron transport chain (ETC)] and leads to the disruption of complex-III activity, decreased ATP generation, increased ROS level and promastigotes exhibited apoptosis like death. Interestingly, single knockout of UMSBP (LdU(-/+)) has no effect on promastigotes survival. However, single knockout in intracellular amastigotes demonstrate loss of mRNA level of cytochrome-b, disruption in the activity of complex-III and reduced production of ATP in amastigotes than wild type. This process interfere with the oxidative-phosphorylation and thereby completely inhibit the intracellular proliferation of LdU(-/+) amastigotes in human macrophages and in BALB/c mice. Amastigotes proliferation was restored as wild type after episomal expression of LdUMSBP in LdU(-/+) parasites (LdU(-/+)AB).

conclusionThe LdUMSBP regulates leishmanial mitochondrial respiration and pathogenesis. So, LdUMSBP may be an attractive target for rational drug designing and LdU(-/+) parasites could be considered as a live attenuated vaccine candidate against visceral leishmaniasis.

Indexed as

ApoptosisCBRLETCkDNALeishmania donovaniOxidative phosphorylationUMSBP

Identifiers

PMID26889377
PMCPMC4756535
OpenAlexW2285027200

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.