Evidence map›Paper›PMID 26889007›Full record

ArticleJournal of experimental botany2016

Tissue-specific root ion profiling reveals essential roles of the CAX and ACA calcium transport systems in response to hypoxia in Arabidopsis.

Feifei Wang, Zhong-Hua Chen, Xiaohui Liu, Timothy David Colmer, Meixue Zhou, Sergey Shabala

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
19.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 73 citations in OpenAlex.

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  4. Intrinsic Mechanism of CaClInternational journal of molecular sciences · 2024
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  5. Calcium signaling-mediated transcriptional reprogramming during abiotic stress response in plants.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
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  18. CaInternational journal of molecular sciences · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Feifei WangSchool of Land and Food, University of Tasmania, Hobart, Tasmania 7001, Australia.
Zhong-Hua ChenSchool of Science and Health, Western Sydney University, Penrith NSW2751, Australia.
Xiaohui LiuSchool of Science and Health, Western Sydney University, Penrith NSW2751, Australia School of Chemical Engineering and Technology, Tianjin University, Tianjin 300072, China.
Timothy David ColmerSchool of Plant Biology and Institute of Agriculture, The University of Western Australia, Crawley, WA 6009, Australia.
Meixue ZhouSchool of Land and Food, University of Tasmania, Hobart, Tasmania 7001, Australia.
Sergey ShabalaSchool of Land and Food, University of Tasmania, Hobart, Tasmania 7001, Australia Sergey.Shabala@utas.edu.au.
University of Tasmania · AUWestern Sydney University · AUUniversity of Western Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Waterlogging is a major abiotic stress that limits the growth of plants. The crucial role of Ca(2+) as a second messenger in response to abiotic and biotic stimuli has been widely recognized in plants. However, the physiological and molecular mechanisms of Ca(2+) distribution within specific cell types in different root zones under hypoxia is poorly understood. In this work, whole-plant physiological and tissue-specific Ca(2+) changes were studied using several ACA (Ca(2+)-ATPase) and CAX (Ca(2+)/proton exchanger) knock-out Arabidopsis mutants subjected to waterlogging treatment. In the wild-type (WT) plants, several days of hypoxia decreased the expression of ACA8, CAX4, and CAX11 by 33% and 50% compared with the control. The hypoxic treatment also resulted in an up to 11-fold tissue-dependent increase in Ca(2+) accumulation in root tissues as revealed by confocal microscopy. The increase was much higher in stelar cells in the mature zone of Arabidopsis mutants with loss of function for ACA8, ACA11, CAX4, and CAX11 In addition, a significantly increased Ca(2+) concentration was found in the cytosol of stelar cells in the mature zone after hypoxic treatment. Three weeks of waterlogging resulted in dramatic loss of shoot biomass in cax11 plants (67% loss in shoot dry weight), while in the WT and other transport mutants this decline was only 14-22%. These results were also consistent with a decline in leaf chlorophyll fluorescence (F v/F m). It is suggested that CAX11 plays a key role in maintaining cytosolic Ca(2+) homeostasis and/or signalling in root cells under hypoxic conditions.

Indexed as

AnaerobiosisArabidopsisArabidopsis ProteinsCalciumIon TransportPlant RootsArabidopsis ProteinsCalciumCa2+-ATPaseCa2+/proton exchangercalciumconfocal microscopyepidermishypoxiapotassiumsodiumstelewaterlogging.

Identifiers

PMID26889007
PMCPMC4896357
OpenAlexW2412385061

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.