Evidence map›Paper›PMID 26888469›Full record

ArticleInfectious diseases of poverty2016

Virtual screening of the inhibitors targeting at the viral protein 40 of Ebola virus.

V Karthick, N Nagasundaram, C George Priya Doss, Chiranjib Chakraborty, R Siva, Aiping Lu, Ge Zhang, Hailong Zhu

Open access · goldAbstract read
In one paragraph

Article in Infectious diseases of poverty, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Pooled it
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  5. Cheminformatics-Based Study Identifies Potential Ebola VP40 Inhibitors.International journal of molecular sciences · 2023
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  15. Computational methods in drug discovery.Beilstein journal of organic chemistry · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

V KarthickSchool of Chinese Medicine, Hong Kong Baptist University, Kowloon Tong, Hong Kong.
N NagasundaramSchool of Chinese Medicine, Hong Kong Baptist University, Kowloon Tong, Hong Kong.
C George Priya DossSchool of Chinese Medicine, Hong Kong Baptist University, Kowloon Tong, Hong Kong.
Chiranjib ChakrabortySchool of Chinese Medicine, Hong Kong Baptist University, Kowloon Tong, Hong Kong.
R SivaDepartment of Biotechnology, School of Biosciences and Technology, VIT University, Vellore, Tamil Nadu, India.
Aiping LuSchool of Chinese Medicine, Hong Kong Baptist University, Kowloon Tong, Hong Kong.
Ge ZhangSchool of Chinese Medicine, Hong Kong Baptist University, Kowloon Tong, Hong Kong.
Hailong ZhuSchool of Chinese Medicine, Hong Kong Baptist University, Kowloon Tong, Hong Kong. hlzhu@hkbu.edu.hk.
Hong Kong Baptist University · HKVellore Institute of Technology University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Ebola virus is highly pathogenic and destructive to humans and other primates. The Ebola virus encodes viral protein 40 (VP40), which is highly expressed and regulates the assembly and release of viral particles in the host cell. Because VP40 plays a prominent role in the life cycle of the Ebola virus, it is considered as a key target for antiviral treatment. However, there is currently no FDA-approved drug for treating Ebola virus infection, resulting in an urgent need to develop effective antiviral inhibitors that display good safety profiles in a short duration.

methodsThis study aimed to screen the effective lead candidate against Ebola infection. First, the lead molecules were filtered based on the docking score. Second, Lipinski rule of five and the other drug likeliness properties are predicted to assess the safety profile of the lead candidates. Finally, molecular dynamics simulations was performed to validate the lead compound.

resultsOur results revealed that emodin-8-beta-D-glucoside from the Traditional Chinese Medicine Database (TCMD) represents an active lead candidate that targets the Ebola virus by inhibiting the activity of VP40, and displays good pharmacokinetic properties.

conclusionThis report will considerably assist in the development of the competitive and robust antiviral agents against Ebola infection.

Indexed as

Antiviral AgentsDrug Evaluation, PreclinicalEbolavirusHEK293 CellsHemorrhagic Fever, EbolaHumansMolecular Docking SimulationViral ProteinsAntiviral AgentsViral Proteins

Identifiers

PMID26888469
PMCPMC4757971
OpenAlexW2284377385

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.