Evidence map›Paper›PMID 26887654›Full record

ArticleBMC bioinformatics2016

Drug repurposing to target Ebola virus replication and virulence using structural systems pharmacology.

Zheng Zhao, Che Martin, Raymond Fan, Philip E Bourne, Lei Xie

Open access · goldAbstract read
In one paragraph

Article in BMC bioinformatics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 51 citations in OpenAlex.

  1. Pooled it
  2. Cheminformatics-Based Study Identifies Potential Ebola VP40 Inhibitors.International journal of molecular sciences · 2023
    Article
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  5. Review
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  16. Article
  17. Discovering Drugs for the Treatment of Ebola Virus.Current treatment options in infectious diseases · 2017
    Review
  18. Article
  19. Article
  20. Repurposed Therapeutic Agents Targeting the Ebola Virus: A Systematic Review.Current therapeutic research, clinical and experimental
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 2 countries.

Zheng ZhaoHigh Magnetic Field Laboratory, Chinese Academy of Sciences, Hefei, P. R. China.
Che MartinThe Graduate Center, The City University of New York, New York, USA.
Raymond FanDepartment of Chemistry, Hunter College, The City University of New York, New York, USA.
Philip E BourneOffice of the Director, National Institutes of Health, Bethesda, MD, USA.
Lei XieThe Graduate Center, The City University of New York, New York, USA. lxie@iscb.org.
City University of New York · USHunter College · USNational Center for Biotechnology Information · USOffice of the Director · USThe Graduate Center, CUNY · US

Funding

Structural Bioinformatics, Systems Pharmacology and Scholarly CommunicationZIALM000928 · NLM · NATIONAL LIBRARY OF MEDICINE · PI BOURNE, PHILIP · 2015 to 2016
$1.3M
Drug discovery by integrating chemical genomics and structural systems biologyR01LM011986 · NLM · HUNTER COLLEGE · PI BRINKMAN, FIONA, BURLEY, STEPHEN K · 2014 to 2017
$1.2M
NLM NIH HHS R01 LM011986NLM NIH HHS R01-LM011986
6 · The paper itself

Abstract

backgroundThe recent outbreak of Ebola has been cited as the largest in history. Despite this global health crisis, few drugs are available to efficiently treat Ebola infections. Drug repurposing provides a potentially efficient solution to accelerating the development of therapeutic approaches in response to Ebola outbreak. To identify such candidates, we use an integrated structural systems pharmacology pipeline which combines proteome-scale ligand binding site comparison, protein-ligand docking, and Molecular Dynamics (MD) simulation.

resultsOne thousand seven hundred and sixty-six FDA-approved drugs and 259 experimental drugs were screened to identify those with the potential to inhibit the replication and virulence of Ebola, and to determine the binding modes with their respective targets. Initial screening has identified a number of promising hits. Notably, Indinavir; an HIV protease inhibitor, may be effective in reducing the virulence of Ebola. Additionally, an antifungal (Sinefungin) and several anti-viral drugs (e.g. Maraviroc, Abacavir, Telbivudine, and Cidofovir) may inhibit Ebola RNA-directed RNA polymerase through targeting the MTase domain.

conclusionsIdentification of safe drug candidates is a crucial first step toward the determination of timely and effective therapeutic approaches to address and mitigate the impact of the Ebola global crisis and future outbreaks of pathogenic diseases. Further in vitro and in vivo testing to evaluate the anti-Ebola activity of these drugs is warranted.

Indexed as

DNA ReplicationDrug RepositioningEbolavirusHumansVirulenceVirus Replication

Identifiers

PMID26887654
PMCPMC4757998
OpenAlexW2283470404

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.