Evidence map›Paper›PMID 26885833›Full record

ArticlePloS one2016

Rapid Discovery and Functional Characterization of Terpene Synthases from Four Endophytic Xylariaceae.

Weihua Wu, William Tran, Craig A Taatjes, Jorge Alonso-Gutierrez, Taek Soon Lee, John M Gladden

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 45 citations in OpenAlex.

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  3. Genomic Features ofJournal of fungi (Basel, Switzerland) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Weihua WuBiomass Science & Conversion Technologies, Sandia National Laboratories, Livermore, California, United States of America.
William TranBiomass Science & Conversion Technologies, Sandia National Laboratories, Livermore, California, United States of America.
Craig A TaatjesCombustion Chemistry Department, Sandia National Laboratories, Livermore, California, United States of America.
Jorge Alonso-GutierrezPhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Taek Soon LeePhysical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
John M GladdenBiomass Science & Conversion Technologies, Sandia National Laboratories, Livermore, California, United States of America.
Sandia National Laboratories California · USJoint BioEnergy Institute · USLawrence Berkeley National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endophytic fungi are ubiquitous plant endosymbionts that establish complex and poorly understood relationships with their host organisms. Many endophytic fungi are known to produce a wide spectrum of volatile organic compounds (VOCs) with potential energy applications, which have been described as "mycodiesel". Many of these mycodiesel hydrocarbons are terpenes, a chemically diverse class of compounds produced by many plants, fungi, and bacteria. Due to their high energy densities, terpenes, such as pinene and bisabolene, are actively being investigated as potential "drop-in" biofuels for replacing diesel and aviation fuel. In this study, we rapidly discovered and characterized 26 terpene synthases (TPSs) derived from four endophytic fungi known to produce mycodiesel hydrocarbons. The TPS genes were expressed in an E. coli strain harboring a heterologous mevalonate pathway designed to enhance terpene production, and their product profiles were determined using Solid Phase Micro-Extraction (SPME) and GC-MS. Out of the 26 TPS's profiled, 12 TPS's were functional, with the majority of them exhibiting both monoterpene and sesquiterpene synthase activity.

Indexed as

Alkyl and Aryl TransferasesAmino Acid SequenceEndophytesEscherichia coliGenes, FungalMolecular Sequence DataMultigene FamilyPhylogenySequence AlignmentTerminology as TopicTerpenesXylarialesAlkyl and Aryl TransferasesTerpenesterpene synthase

Identifiers

PMID26885833
PMCPMC4757406
OpenAlexW2282010923

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.