Evidence map›Paper›PMID 26885033›Full record

ArticleInternational journal of clinical and experimental medicine2015

Cytochrome P450 2C9 (CYP2C9) polymorphisms in Chinese Li population.

Yipeng Ding, Danlei Yang, Long Zhou, Ping He, Jinjian Yao, Pingdong Xie, Daobo Lin, Dingwei Sun, Pei Sun, Quanni Li and 2 more

Open access · greenAbstract read
In one paragraph

Article in International journal of clinical and experimental medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Trial
  2. Article
  3. Genophenotypic Factors and Pharmacogenomics in Adverse Drug Reactions.International journal of molecular sciences · 2021
    Review
  4. Article
  5. Article
  6. Biomedical reports · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Yipeng DingDepartment of Emergency, People's Hospital of Hainan Province Haikou 570311, Hainan, China.
Danlei YangDepartment of Respiratory and Critical Care Medicine, Tongji Hospital, Key Laboratory of Pulmonary Diseases of Health MinistryWuhan 430030, China; Huazhong University of Science and Technology1095 Jiefang Dadao Road, Wuhan 430030, China.
Long ZhouSchool of Life Sciences, Northwest University Xi'an 710069, China.
Ping HeDepartment of Emergency, People's Hospital of Hainan Province Haikou 570311, Hainan, China.
Jinjian YaoDepartment of Emergency, People's Hospital of Hainan Province Haikou 570311, Hainan, China.
Pingdong XieDepartment of Emergency, People's Hospital of Hainan Province Haikou 570311, Hainan, China.
Daobo LinDepartment of Emergency, People's Hospital of Hainan Province Haikou 570311, Hainan, China.
Dingwei SunDepartment of Emergency, People's Hospital of Hainan Province Haikou 570311, Hainan, China.
Pei SunDepartment of Emergency, People's Hospital of Hainan Province Haikou 570311, Hainan, China.
Quanni LiDepartment of Emergency, People's Hospital of Hainan Province Haikou 570311, Hainan, China.
Tingting GengNational Engineering Research Center for Miniaturized Detection Systems Xi'an 710069, China.
Tianbo JinSchool of Life Sciences, Northwest UniversityXi'an 710069, China; National Engineering Research Center for Miniaturized Detection SystemsXi'an 710069, China.
Haikou City People's Hospital · CNNorthwest University · CNDetection Limit (United States) · USHuazhong University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe frequencies of Cytochrome P450 2C9 (CYP2C9) genotypes were various between populations. The aim of this study was to investigate the frequencies of the major variants of the CYP2C9 in Chinese Li minority populations.

methodsThe promoter, exons and surrounding introns, and 3'-untranslated region of the CYP2C9 gene was detected by DNA sequencing to investigate in 100 unrelated healthy Chinese Li subjects. The protein function prediction was used the online tools: Sorting Intolerant From Tolerant (SIFT) and Phenotyping Version 2 (PolyPhen-2). The comparison of CYP2C9 allele frequencies in different populations were analyzed by Chi-square (χ(2)) test. Linkage disequilibrium (LD) analysis was performed using Haploview software.

resultsWe identified 17 different CYP2C9 single nucleotide polymorphisms (SNPs) in the Li population, including two missense mutations (3549 G > A and 42614 A > C) and two silent mutations (3514 T > Cand 50298A > T). The protein function prediction revealed the two missense mutations result in protein damaging. In addition, we detected the allele frequencies of CYP2C9*1, CYP2C9*3 and CYP2C9*42 were 98%, 1%, and 1%, respectively. Finally, we compared three major allelic frequency (CYP2C9*1, CYP2C9*2, and CYP2C9*3) between Li and other populations. We found that our results were similar to East Asians and Africans.

Indexed as

allele frequenciesChinese Li minority populationsCYP2C9CYP2C9*1CYP2C9*3CYP2C9*42

Identifiers

PMID26885033
PMCPMC4723878
OpenAlexW2413373120

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.