ArticlePlant methods2016
Phenomics for photosynthesis, growth and reflectance in Arabidopsis thaliana reveals circadian and long-term fluctuations in heritability.
Article in Plant methods, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
52 citing papers in PubMed.
- Using ΦPSII and leaf temperature as indicators of non-steady-state photosynthesis and stomatal conductance during stepwise changes in light intensity.Journal of experimental botany · 2026Article
- Highly Polygenic Control of Photosynthetic Responses to Nighttime Temperature Studied by Genomic Prediction.Plant, cell & environment · 2026Article
- Uncovering adaptation with a new Arabidopsis thaliana multiparent intercross population.Genetics · 2026Article
- Advancements in photosynthetic efficiency: Pathways, regulation, and biotechnological applications for enhancing crop productivity.Plant signaling & behavior · 2025Review
- MADI: A multispectral automated dynamic imager to monitor plant health.Plant phenomics (Washington, D.C.) · 2025Article
- Across-rotation genetic analysis and multitrait selection in a cloned cross ofFrontiers in plant science · 2025Article
- Species-wide inventory ofProceedings of the National Academy of Sciences of the United States of America · 2024Article
- Genome-wide Association Studies of Photosynthetic and Agronomic Traits in Cowpea Collection.G3 (Bethesda, Md.) · 2024Article
- Perspectives on improving photosynthesis to increase crop yield.The Plant cell · 2024Review
- Exploring natural genetic variation in photosynthesis-related traits of barley in the field.Journal of experimental botany · 2024Article
- Current status of community resources and priorities for weed genomics research.Genome biology · 2024Review
- Genome-wide association analysis reveals genes controlling an antagonistic effect of biotic and osmotic stress on Arabidopsis thaliana growth.Molecular plant pathology · 2024Article
- LeTra: a leaf tracking workflow based on convolutional neural networks and intersection over union.Plant methods · 2024Article
- A High-Throughput Approach for Photosynthesis Studies in a Brassicaceae Panel.Methods in molecular biology (Clifton, N.J.) · 2024Article
- Chlorophyll fluorescence-based high-throughput phenotyping facilitates the genetic dissection of photosynthetic heat tolerance in African (Oryza glaberrima) and Asian (Oryza sativa) rice.Journal of experimental botany · 2023Article
- A Comprehensive Review of High Throughput Phenotyping and Machine Learning for Plant Stress Phenotyping.Phenomics (Cham, Switzerland) · 2022Review
- Using breeding and quantitative genetics to understand the C4 pathway.Journal of experimental botany · 2022Article
- Application of time lags between light and temperature cycles for growth control based on the circadian clock ofFrontiers in plant science · 2022Article
- Comprehensive evaluation of mapping complex traits in wheat using genome-wide association studies.Molecular breeding : new strategies in plant improvement · 2022Review
- Inter-tissue and inter-organ signaling in drought stress response and phenotyping of drought tolerance.The Plant journal : for cell and molecular biology · 2022Review
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundRecent advances in genome sequencing technologies have shifted the research bottleneck in plant sciences from genotyping to phenotyping. This shift has driven the development of phenomics, high-throughput non-invasive phenotyping technologies.
resultsWe describe an automated high-throughput phenotyping platform, the Phenovator, capable of screening 1440 Arabidopsis plants multiple times per day for photosynthesis, growth and spectral reflectance at eight wavelengths. Using this unprecedented phenotyping capacity, we have been able to detect significant genetic differences between Arabidopsis accessions for all traits measured, across both temporal and environmental scales. The high frequency of measurement allowed us to observe that heritability was not only trait specific, but for some traits was also time specific.
conclusionsSuch continuous real-time non-destructive phenotyping will allow detailed genetic and physiological investigations of the kinetics of plant homeostasis and development. The success and ultimate outcome of a breeding program will depend greatly on the genetic variance which is sampled. Our observation of temporal fluctuations in trait heritability shows that the moment of measurement can have lasting consequences. Ultimately such phenomic level technologies will provide more dynamic insights into plant physiology, and the necessary data for the omics revolution to reach its full potential.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.