Evidence map›Paper›PMID 26883194›Full record

ArticleOncotarget2016

Integrated genomic approaches identify upregulation of SCRN1 as a novel mechanism associated with acquired resistance to erlotinib in PC9 cells harboring oncogenic EGFR mutation.

Nayoung Kim, Ahye Cho, Hideo Watanabe, Yoon-La Choi, Meraj Aziz, Michelle Kassner, Je-Gun Joung, Angela Kyung-Joo Park, Joshua M Francis, Joon Seol Bae and 9 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 2 countries.

Nayoung KimDepartment of NanoBio Medical Science, Dankook University, Cheonan 31116, Republic of Korea.
Ahye ChoDepartment of Health Sciences and Technology, SAIHST, Sungkyunkwan University, Seoul 135-967, Republic of Korea.
Hideo WatanabeDepartment of Medicine, Division of Pulmonary, Critical Care and Sleep Medicine, New York, NY 10029, USA.
Yoon-La ChoiDepartment of Health Sciences and Technology, SAIHST, Sungkyunkwan University, Seoul 135-967, Republic of Korea.
Meraj AzizCancer and Cell Biology Division, Translational Genomics Research Institute, Scottsdale, AZ 85259, USA.
Michelle KassnerCancer and Cell Biology Division, Translational Genomics Research Institute, Scottsdale, AZ 85259, USA.
Je-Gun JoungSamsung Genome Institute, Samsung Medical Center, Seoul 135-967, Republic of Korea.
Angela Kyung-Joo ParkDepartment of NanoBio Medical Science, Dankook University, Cheonan 31116, Republic of Korea.
Joshua M FrancisCancer Program, Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA.
Joon Seol BaeSamsung Genome Institute, Samsung Medical Center, Seoul 135-967, Republic of Korea.
Soo-Min AhnDepartment of Pathology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul 135-967, Republic of Korea.
Kyoung-Mee KimDepartment of Pathology, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul 135-967, Republic of Korea.
Joon Oh ParkDivision of Hematology-Oncology, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul 135-967, Republic of Korea.
Woong-Yang ParkDepartment of Health Sciences and Technology, SAIHST, Sungkyunkwan University, Seoul 135-967, Republic of Korea.
Myung-Ju AhnDivision of Hematology-Oncology, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul 135-967, Republic of Korea.
Keunchil ParkDivision of Hematology-Oncology, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul 135-967, Republic of Korea.
Jaehyung KooDepartment of Brain and Cognitive Sciences, DGIST, Daegu 42988, Republic of Korea.
Hongwei Holly YinCancer and Cell Biology Division, Translational Genomics Research Institute, Scottsdale, AZ 85259, USA.
Jeonghee ChoDepartment of NanoBio Medical Science, Dankook University, Cheonan 31116, Republic of Korea.
Sungkyunkwan University · KRSamsung Medical Center · KRTranslational Genomics Research Institute · USBroad Institute · USDaegu Gyeongbuk Institute of Science and Technology · KRDankook University · KRIcahn School of Medicine at Mount Sinai · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Therapies targeting the tyrosine kinase activity of Epidermal Growth Factor Receptor (EGFR) have been proven to be effective in treating a subset of non-small cell lung cancer (NSCLC) patients harboring activating EGFR mutations. Inevitably these patients develop resistance to the EGFR-targeted tyrosine kinase inhibitors (TKIs). Here, we performed integrated genomic analyses using an in vitro system to uncover alternative genomic mechanisms responsible for acquired resistance to EGFR-TKIs. Specifically, we identified 80 genes whose expression is significantly increased in the erlotinib-resistant clones. RNAi-based systematic synthetic lethal screening of these candidate genes revealed that suppression of one upregulated transcript, SCRN1, a secernin family member, restores sensitivity to erlotinib by enhancing inhibition of PI3K/AKT signaling pathway. Furthermore, immunohistochemical analysis revealed increased levels of SCRN1 in 5 of 11 lung tumor specimens from EGFR-TKIs resistant patients. Taken together, we propose that upregulation of SCRN1 is an additional mechanism associated with acquired resistance to EGFR-TKIs and that its suppression serves as a novel therapeutic strategy to overcome drug resistance in these patients.

Indexed as

MutationAnimalsApoptosisBiomarkers, TumorCarcinogenesisCarcinoma, Non-Small-Cell LungCell ProliferationDrug Resistance, NeoplasmErbB ReceptorsErlotinib HydrochlorideGenomicsHumansLung NeoplasmsMaleMiceMice, NudeBiomarkers, TumorEGFR protein, humanErbB ReceptorsErlotinib HydrochlorideNerve Tissue ProteinsProtein Kinase InhibitorsRNA, Small InterferingSCRN1 protein, humanEGFRerlotinib resistancelung adenocarcinomaSCRN1

Identifiers

PMID26883194
PMCPMC4924679
OpenAlexW2293901317

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.