Evidence map›Paper›PMID 26883104›Full record

ArticleOncotarget2016

Prognostic and therapeutic role of targetable lesions in B-lineage acute lymphoblastic leukemia without recurrent fusion genes.

Monica Messina, Sabina Chiaretti, Jiguang Wang, Anna Lucia Fedullo, Nadia Peragine, Valentina Gianfelici, Alfonso Piciocchi, Fulvia Brugnoletti, Filomena Di Giacomo, Simona Pauselli and 12 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. The Genomic Landscape of a Restricted ALL Cohort from Patients Residing on the U.S./Mexico Border.International journal of environmental research and public health · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Next-Generation Sequencing in Acute Lymphoblastic Leukemia.International journal of molecular sciences · 2019
    Review
  15. Article
  16. Biological Aspects of mTOR in Leukemia.International journal of molecular sciences · 2018
    Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 6 institutions in 2 countries.

Monica MessinaHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Sabina ChiarettiHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Jiguang WangDepartment of Systems Biology, Biomedical Informatics and Center for Computational Biology and Bioinformatics, Columbia University, New York, NY, USA.
Anna Lucia FedulloHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Nadia PeragineHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Valentina GianfeliciHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Alfonso PiciocchiGIMEMA Data Center, Rome, Italy.
Fulvia BrugnolettiHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Filomena Di GiacomoDepartment of Molecular Biotechnology and Health Science, and Center for Experimental Research and Medical Studies (CeRMS), University of Torino, Torino, Italy.
Simona PauselliHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Antony B HolmesInstitute for Cancer Genetics and The Herbert Irving Comprehensive Cancer Center, Columbia University, New York, NY, USA.
Maria Cristina PuzzoloHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Giulia CeglieHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Valerio ApicellaHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Marco ManciniHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Geertruy Te KronnieDepartment of Women's and Children's Health, University of Padova, Padova, Italy.
Anna Maria TestiHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Antonella VitaleHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Marco VignettiGIMEMA Data Center, Rome, Italy.
Anna GuariniHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Raul RabadanDepartment of Systems Biology, Biomedical Informatics and Center for Computational Biology and Bioinformatics, Columbia University, New York, NY, USA.
Robin FoàHematology, Department of Cellular Biotechnologies and Hematology, Sapienza University, Rome, Italy.
Sapienza University of Rome · ITColumbia University · USFondazione Gimema Onlus · ITCancer Genetics (United States) · USUniversity of Padua · ITUniversity of Turin · IT

Funding

Clinical and Translational Science AwardUL1TR000040 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GINSBERG, HENRY N · 2012 to 2015
$26.2M
Topology of Cancer Evolution and HeterogeneityU54CA193313 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI IAVARONE, ANTONIO, RABADAN, RAUL · 2015 to 2020
$10.4M
NCATS NIH HHS UL1 TR000040NCI NIH HHS U54 CA193313
6 · The paper itself

Abstract

To shed light into the molecular bases of B-lineage acute lymphoblastic leukemia lacking known fusion transcripts, i.e. BCR-ABL1, ETV6-RUNX1, E2A-PBX1, and MLL rearrangements (B-NEG ALL) and the differences between children, adolescents/young adults (AYA) and adults, we analyzed 168 B-NEG ALLs by genome-wide technologies. This approach showed that B-NEG cases carry 10.5 mutations and 9.1 copy-number aberrations/sample. The most frequently mutated druggable pathways were those pertaining to RAS/RTK (26.8%) and JAK/STAT (12.5%) signaling. In particular, FLT3 and JAK/STAT mutations were detected mainly in AYA and adults, while KRAS and NRAS mutations were more frequent in children. RAS/RTK mutations negatively affected the outcome of AYA and adults, but not that of children. Furthermore, adult B-NEG ALL carrying JAK/STAT mutations had a shorter survival. In vitro experiments showed that FLT3 inhibitors reduced significantly the proliferation of FLT3-mutated primary B-NEG ALL cells. Likewise, PI3K/mTOR inhibitors reduced the proliferation of primary cells harboring RAS and IL7R mutations. These results refine the genetic landscape of B-NEG ALL and suggest that the different distribution of lesions and their prognostic impact might sustain the diverse outcome between children, adults and partly AYA - whose genomic scenario is similar to adults - and open the way to targeted therapeutic strategies.

Indexed as

MutationPolymorphism, Single NucleotideAdolescentAdultAgedBiomarkers, TumorCell LineageChildChild, PreschoolFemaleFollow-Up StudiesGene Expression ProfilingGene Expression Regulation, LeukemicHumansInfantMaleBiomarkers, TumorOncogene Proteins, Fusionacute lymphoblastic leukemiacopy number aberrationsgenetic-driven targeted therapynext generation sequencingnovel prognostic markers

Identifiers

PMID26883104
PMCPMC4924686
OpenAlexW2274867445

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.