Evidence map›Paper›PMID 26882892›Full record

ArticleGenetica2016

Analysis of root-knot nematode and fusarium wilt disease resistance in cotton (Gossypium spp.) using chromosome substitution lines from two alien species.

M Ulloa, C Wang, S Saha, R B Hutmacher, D M Stelly, J N Jenkins, J Burke, P A Roberts

Abstract read
PubMed Publisher
In one paragraph

Article in Genetica, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Combating Root-Knot Nematodes (Plants (Basel, Switzerland) · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Features of Chromosome Introgression fromPlants (Basel, Switzerland) · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Development and use of chromosome segment substitution lines as a genetic resource for crop improvement.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Review
  12. Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

M UlloaUSDA-ARS, PA, CSRL, Plant Stress and Germplasm Development Research, 3810 4th Street, Lubbock, TX, 79415, USA. Mauricio.Ulloa@ars.usda.gov.
C WangDepartment of Nematology, University of California, Riverside, CA, 92521, USA.
S SahaUSDA-ARS, Mississippi State, MS, 39762, USA.
R B HutmacherDepartment of Plant Sciences, University of California-Davis, Five Points, CA, 93624, USA.
D M StellyDepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX, 77843, USA.
J N JenkinsUSDA-ARS, Mississippi State, MS, 39762, USA.
J BurkeUSDA-ARS, PA, CSRL, Plant Stress and Germplasm Development Research, 3810 4th Street, Lubbock, TX, 79415, USA.
P A RobertsDepartment of Nematology, University of California, Riverside, CA, 92521, USA. Philip.roberts@ucr.edu.
Mississippi State University · USUniversity of California, Riverside · USTexas A&M University · USUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromosome substitution (CS) lines in plants are a powerful genetic resource for analyzing the contribution of chromosome segments to phenotypic variance. In this study, a series of interspecific cotton (Gossypium spp.) CS lines were used to identify a new germplasm resource, and to validate chromosomal regions and favorable alleles associated with nematode or fungal disease resistance traits. The CS lines were developed in the G. hirsutum L. TM-1 background with chromosome or chromosome segment substitutions from G. barbadense L. Pima 3-79 or G. tomentosum. Root-knot nematode (Meloidogyne incognita) and fusarium wilt (Fusarium oxysporum f. sp. vasinfectum) (races 1 and 4) resistance alleles and quantitative trait loci (QTL) previously placed on cotton chromosomes using SSR markers in two interspecific recombinant inbred line populations were chosen for testing. Phenotypic responses of increased resistance or susceptibility in controlled inoculation and infested field assays confirmed the resistance QTLs, based on substitution with the positive or negative allele for resistance. Lines CS-B22Lo, CS-B04, and CS-B18 showed high resistance to nematode root-galling, confirming QTLs on chromosomes 4 and 22 (long arm) with resistance alleles from Pima 3-79. Line CS-B16 had less fusarium race 1-induced vascular root staining and higher percent survival than the TM-1 parent, confirming a major resistance QTL on chromosome 16. Lines CS-B(17-11) and CS-B17 had high fusarium race 4 vascular symptoms and low survival due to susceptible alleles introgressed from Pima 3-79, confirming the localization on chromosome 17 of an identified QTL with resistance alleles from TM1 and other resistant lines. Analyses validated regions on chromosomes 11, 16, and 17 harboring nematode and fusarium wilt resistance genes and demonstrated the value of CS lines as both a germplasm resource for breeding programs and as a powerful genetic analysis tool for determining QTL effects for disease resistance. CS lines carrying small alien chromosome segments with favorable QTL alleles could be used for effective introgression of biotic stress resistance or many other desirable traits by targeting gene interactions and reducing linkage drag effects.

Indexed as

FusariumTylenchoideaAllelesAnimalsChromosomes, PlantCrosses, GeneticDisease ResistanceGenetic MarkersGossypiumMicrosatellite RepeatsPhenotypePlant BreedingPlant DiseasesQuantitative Trait LociGenetic MarkersAllelesDisease resistanceNematode egg productionPima cottonPlant survivalQTL mappingQuantitative trait lociResistance genesRoot galling indexUpland cottonVascular root staining

Identifiers

PMID26882892
OpenAlexW2282853177

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.