Evidence map›Paper›PMID 26881054›Full record

ArticleMovement ecology2016

Gene expression in the brain of a migratory songbird during breeding and migration.

John Boss, Miriam Liedvogel, Max Lundberg, Peter Olsson, Nils Reischke, Sara Naurin, Susanne Åkesson, Dennis Hasselquist, Anthony Wright, Mats Grahn and 1 more

Open access · goldAbstract read
In one paragraph

Article in Movement ecology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.9field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Molecular changes and physiological responses involved in migratory bird fuel management and stopover decisions.Journal of experimental zoology. Part A, Ecological and integrative physiology · 2025
    Article
  3. Article
  4. Avian migration clocks in a changing world.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2024
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. PeerJ · 2018
    Article
  13. Two sides of a coin: ecological and chronobiological perspectives of timing in the wild.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  14. Timing avian long-distance migration: from internal clock mechanisms to global flights.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  15. Gene expression shifts in yellow-bellied marmots prior to natal dispersal.Behavioral ecology : official journal of the International Society for Behavioral Ecology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

John BossKarolinska Institute, Department of Laboratory Medicine, Clinical Research Center, Karolinska University Hospital, SE-14186 Huddinge, Sweden ; School of Natural Sciences, Technology and Environmental Studies, Södertörn University, SE-141 89 Huddinge, Sweden.
Miriam LiedvogelDepartment of Biology, Molecular Ecology and Evolution Laboratory, Lund University, Ecology Building, SE-22362 Lund, Sweden ; Max Planck Institute for Evolutionary Biology, AG Behavioural Genomics, August-Thienemann-Straße 2, 24306 Plön, Germany.
Max LundbergDepartment of Biology, Molecular Ecology and Evolution Laboratory, Lund University, Ecology Building, SE-22362 Lund, Sweden.
Peter OlssonCentre of Environmental and Climate Research, Lund University, Ecology Building, SE-223 62 Lund, Sweden.
Nils ReischkeDepartment of Biology, Molecular Ecology and Evolution Laboratory, Lund University, Ecology Building, SE-22362 Lund, Sweden.
Sara NaurinDepartment of Biology, Molecular Ecology and Evolution Laboratory, Lund University, Ecology Building, SE-22362 Lund, Sweden.
Susanne ÅkessonDepartment of Biology, Centre for Animal Movement Research, Lund University, Ecology Building, SE-22362 Lund, Sweden.
Dennis HasselquistDepartment of Biology, Molecular Ecology and Evolution Laboratory, Lund University, Ecology Building, SE-22362 Lund, Sweden.
Anthony WrightKarolinska Institute, Department of Laboratory Medicine, Clinical Research Center, Karolinska University Hospital, SE-14186 Huddinge, Sweden.
Mats GrahnKarolinska Institute, Department of Laboratory Medicine, Clinical Research Center, Karolinska University Hospital, SE-14186 Huddinge, Sweden.
Staffan BenschDepartment of Biology, Molecular Ecology and Evolution Laboratory, Lund University, Ecology Building, SE-22362 Lund, Sweden.
Lund University · SEKarolinska University Hospital · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWe still have limited knowledge about the underlying genetic mechanisms that enable migrating species of birds to navigate the globe. Here we make an attempt to get insight into the genetic architecture controlling this complex innate behaviour. We contrast the gene expression profiles of two closely related songbird subspecies with divergent migratory phenotypes. In addition to comparing differences in migratory strategy we include a temporal component and contrast patterns between breeding adults and autumn migrating juvenile birds of both subspecies. The two willow warbler subspecies, Phylloscopus trochilus trochilus and P. t. acredula, are remarkably similar both in phenotype and genotype and have a narrow contact zone in central Scandinavia. Here we used a microarray gene chip representing 23,136 expressed sequence tags (ESTs) from the zebra finch Taeniopygia guttata to identify mRNA level differences in willow warbler brain tissue in relation to subspecies and season.

resultsOut of the 22,109 EST probe sets that remained after filtering poorly binding probes, we found 11,898 (51.8 %) probe sets that could be reliably and uniquely matched to a total of 6,758 orthologous zebra finch genes. The two subspecies showed very similar levels of gene expression with less than 0.1 % of the probe sets being significantly differentially expressed. In contrast, 3,045 (13.8 %) probe sets were found to be differently regulated between samples collected from breeding adults and autumn migrating juvenile birds. The genes found to be differentially expressed between seasons appeared to be enriched for functional roles in neuronal firing and neuronal synapse formation.

conclusionsOur results show that only few genes are differentially expressed between the subspecies. This suggests that the different migration strategies of the subspecies might be governed by few genes, or that the expression patterns of those genes are time-structured or tissue-specific in ways, which our approach fails to uncover. Our findings will be useful in the planning of new experiments designed to unravel the genes involved in the migratory program of birds.

Indexed as

BehaviorBirdsCalcium transportGene expressionMicroarrayMigrationPhylloscopus trochilusSynapse

Identifiers

PMID26881054
PMCPMC4753645
OpenAlexW2263369267

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.