Evidence map›Paper›PMID 26879940›Full record

ArticleMicrobial ecology2016

The Influence of Time and Plant Species on the Composition of the Decomposing Bacterial Community in a Stream Ecosystem.

Adam S Wymore, Cindy M Liu, Bruce A Hungate, Egbert Schwartz, Lance B Price, Thomas G Whitham, Jane C Marks

Abstract read
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In one paragraph

Article in Microbial ecology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Adam S WymoreDepartment of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA. adam.wymore@unh.edu.
Cindy M LiuDepartment of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA.
Bruce A HungateDepartment of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA.
Egbert SchwartzDepartment of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA.
Lance B PriceTranslational Genomics Research Institute, Flagstaff, AZ, USA.
Thomas G WhithamDepartment of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA.
Jane C MarksDepartment of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA.
Northern Arizona University · USTranslational Genomics Research Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Foliar chemistry influences leaf decomposition, but little is known about how litter chemistry affects the assemblage of bacterial communities during decomposition. Here we examined relationships between initial litter chemistry and the composition of the bacterial community in a stream ecosystem. We incubated replicated genotypes of Populus fremontii and P. angustifolia leaf litter that differ in percent tannin and lignin, then followed changes in bacterial community composition during 28 days of decomposition using 16S rRNA gene-based pyrosequencing. Using a nested experimental design, the majority of variation in bacterial community composition was explained by time (i.e., harvest day) (R(2) = 0.50). Plant species, nested within harvest date, explained a significant but smaller proportion of the variation (R(2) = 0.03). Significant differences in community composition between leaf species were apparent at day 14, but no significant differences existed among genotypes. Foliar chemistry correlated significantly with community composition at day 14 (r = 0.46) indicating that leaf litter with more similar phytochemistry harbor bacterial communities that are alike. Bacteroidetes and β-proteobacteria dominated the bacterial assemblage on decomposing leaves, and Verrucomicrobia and α- and δ-proteobacteria became more abundant over time. After 14 days, bacterial diversity diverged significantly between leaf litter types with fast-decomposing P. fremontii hosting greater richness than slowly decomposing P. angustifolia; however, differences were no longer present after 28 days in the stream. Leaf litter tannin, lignin, and lignin: N ratios all correlated negatively with diversity. This work shows that the bacterial community on decomposing leaves in streams changes rapidly over time, influenced by leaf species via differences in genotype-level foliar chemistry.

Indexed as

EcosystemBacteriaBiodiversityDNA, BacterialLigninMicrobial ConsortiaPhylogenyPlant LeavesPlantsRiversSoil MicrobiologyTreesUtahWater MicrobiologyDNA, BacterialLignin16S rRNABacteriaLeaf litter chemistryPopulusPyrosequencingStreams

Identifiers

PMID26879940
OpenAlexW2280590233

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.