Evidence map›Paper›PMID 26879577›Full record

ArticleCellular and molecular life sciences : CMLS2016

Evidence of TAF1 dysfunction in peripheral models of X-linked dystonia-parkinsonism.

Aloysius Domingo, David Amar, Karen Grütz, Lillian V Lee, Raymond Rosales, Norbert Brüggemann, Roland Dominic Jamora, Eva Cutiongco-Dela Paz, Arndt Rolfs, Dirk Dressler and 6 more

Open access · greenAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Alterations in energy production in aFrontiers in aging neuroscience · 2026
    Article
  3. Article
  4. Review
  5. The roles of TAF1 in neuroscience and beyond.Royal Society open science · 2024
    Review
  6. Article
  7. Factors influencing reduced penetrance and variable expressivity in X-linked dystonia-parkinsonism.Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2022
    Article
  8. Article
  9. Article
  10. Association Study ofFrontiers in neuroscience · 2022
    Article
  11. X-linked dystonia-parkinsonism: over and above a repeat disorder.Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2021
    Article
  12. Combined dystonias: clinical and genetic updates.Journal of neural transmission (Vienna, Austria : 1996) · 2021
    Review
  13. TAF1 Transcripts and Neurofilament Light Chain as Biomarkers for X-linked Dystonia-Parkinsonism.Movement disorders : official journal of the Movement Disorder Society · 2021
    Article
  14. Article
  15. X-Linked Dystonia-Parkinsonism: recent advances.Current opinion in neurology · 2019
    Review
  16. Observational
  17. Article
  18. Disease onset in X-linked dystonia-parkinsonism correlates with expansion of a hexameric repeat within an SVA retrotransposon inProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 9 institutions in 4 countries.

Aloysius DomingoInstitute of Neurogenetics, University of Lübeck, Maria Goeppert Str. 1, 23562, Lübeck, Germany.ORCID 0000-0002-1396-3303
David AmarEdmond J. Safra Center for Bioinformatics, Tel Aviv University, Tel Aviv, Israel.
Karen GrützInstitute of Neurogenetics, University of Lübeck, Maria Goeppert Str. 1, 23562, Lübeck, Germany.
Lillian V LeeXDP Study Group, Philippine Children's Medical Center, Quezon City, Philippines.
Raymond RosalesDepartment of Neurology and Psychiatry, University of Santo Tomas, Manila, Philippines.
Norbert BrüggemannInstitute of Neurogenetics, University of Lübeck, Maria Goeppert Str. 1, 23562, Lübeck, Germany.
Roland Dominic JamoraDepartment of Neurosciences, College of Medicine, Philippine General Hospital, University of the Philippines Manila, Manila, Philippines.
Eva Cutiongco-Dela PazNational Institutes of Health, University of the Philippines Manila, Manila, Philippines.
Arndt RolfsAlbrecht-Kossel-Institute for Neuroregeneration, University of Rostock, Rostock, Germany.
Dirk DresslerDepartment of Neurology, Hannover Medical School, Hannover, Germany.
Uwe WalterDepartment of Neurology, University of Rostock, Rostock, Germany.
Dimitri KraincNorthwestern University Feinberg School of Medicine, Chicago, IL, USA.
Katja LohmannInstitute of Neurogenetics, University of Lübeck, Maria Goeppert Str. 1, 23562, Lübeck, Germany.
Ron ShamirEdmond J. Safra Center for Bioinformatics, Tel Aviv University, Tel Aviv, Israel.
Christine KleinInstitute of Neurogenetics, University of Lübeck, Maria Goeppert Str. 1, 23562, Lübeck, Germany. christine.klein@neuro.uni-luebeck.de.
Ana WestenbergerInstitute of Neurogenetics, University of Lübeck, Maria Goeppert Str. 1, 23562, Lübeck, Germany.
University of Lübeck · DETel Aviv University · ILUniversity of Rostock · DEMedizinische Hochschule Hannover · DENorthwestern University · USPhilippine General Hospital · PHUniversity Hospital Schleswig-Holstein · DEUniversity of Santo Tomas · PHUniversity of the Philippines Manila · PH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The molecular dysfunction in X-linked dystonia-parkinsonism is not completely understood. Thus far, only noncoding alterations have been found in genetic analyses, located in or nearby the TATA-box binding protein-associated factor 1 (TAF1) gene. Given that this gene is ubiquitously expressed and is a critical component of the cellular transcription machinery, we sought to study differential gene expression in peripheral models by performing microarray-based expression profiling in blood and fibroblasts, and comparing gene expression in affected individuals vs. ethnically matched controls. Validation was performed via quantitative polymerase chain reaction in discovery and independent replication sets. We observed consistent downregulation of common TAF1 transcripts in samples from affected individuals in gene-level and high-throughput experiments. This signal was accompanied by a downstream effect in the microarray, reflected by the dysregulation of 307 genes in the disease group. Gene Ontology and network analyses revealed enrichment of genes involved in RNA polymerase II-dependent transcription, a pathway relevant to TAF1 function. Thus, the results converge on TAF1 dysfunction in peripheral models of X-linked dystonia-parkinsonism, and provide evidence of altered expression of a canonical gene in this disease. Furthermore, our study illustrates a link between the previously described genetic alterations and TAF1 dysfunction at the transcriptome level.

Indexed as

Dystonic DisordersGene Regulatory NetworksGenetic Diseases, X-LinkedHistone AcetyltransferasesHumansMaleTATA-Binding Protein Associated FactorsTranscriptional ActivationTranscription Factor TFIIDTranscriptomeHistone AcetyltransferasesTATA-binding protein associated factor 250 kDaTATA-Binding Protein Associated FactorsTranscription Factor TFIIDExpression profilingMicroarrayNeurodegenerationTranscriptional dysregulationTranscriptomics

Identifiers

PMID26879577
PMCPMC11108471
OpenAlexW2286533764

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.