Evidence map›Paper›PMID 26879144›Full record

ArticleScientific reports2016

Improving brightness and photostability of green and red fluorescent proteins for live cell imaging and FRET reporting.

Bryce T Bajar, Emily S Wang, Amy J Lam, Bongjae B Kim, Conor L Jacobs, Elizabeth S Howe, Michael W Davidson, Michael Z Lin, Jun Chu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 233 papers.

0numbers the graph read from it
0cells of the map it votes in
233citing papers in PubMed
61.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

233 citing papers in PubMed, 430 citations in OpenAlex.

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  16. Efficient and Stable Subcellular Protein Labeling inPathogens (Basel, Switzerland) · 2026
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  17. Review
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  20. Article

173 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Bryce T BajarDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Emily S WangDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Amy J LamDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Bongjae B KimDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Conor L JacobsDepartment of Biology, Stanford University, Stanford, CA, 94305, USA.
Elizabeth S HoweNational High Magnetic Field Laboratory, Tallahasee, FL, USA.
Michael W DavidsonNational High Magnetic Field Laboratory, Tallahasee, FL, USA.
Michael Z LinDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Jun ChuDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Stanford University · USNational High Magnetic Field Laboratory · US

Funding

TRAINING & OUTREACH COREP50GM107615 · NIGMS · STANFORD UNIVERSITY · PI COVERT, MARKUS W · 2013 to 2017
$10.9M
Protein voltage sensors: kilohertz imaging of neural dynamics in behaving animalsU01NS090600 · NINDS · STANFORD UNIVERSITY · PI LIN, MICHAEL Z., SCHNITZER, MARK J · 2014 to 2016
$2.8M
NIGMS NIH HHS P50 GM107615NIGMS NIH HHS P50GM107615NINDS NIH HHS 1U01NS090600NINDS NIH HHS U01 NS090600
6 · The paper itself

Abstract

Many genetically encoded biosensors use Förster resonance energy transfer (FRET) to dynamically report biomolecular activities. While pairs of cyan and yellow fluorescent proteins (FPs) are most commonly used as FRET partner fluorophores, respectively, green and red FPs offer distinct advantages for FRET, such as greater spectral separation, less phototoxicity, and lower autofluorescence. We previously developed the green-red FRET pair Clover and mRuby2, which improves responsiveness in intramolecular FRET reporters with different designs. Here we report the engineering of brighter and more photostable variants, mClover3 and mRuby3. mClover3 improves photostability by 60% and mRuby3 by 200% over the previous generation of fluorophores. Notably, mRuby3 is also 35% brighter than mRuby2, making it both the brightest and most photostable monomeric red FP yet characterized. Furthermore, we developed a standardized methodology for assessing FP performance in mammalian cells as stand-alone markers and as FRET partners. We found that mClover3 or mRuby3 expression in mammalian cells provides the highest fluorescence signals of all jellyfish GFP or coral RFP derivatives, respectively. Finally, using mClover3 and mRuby3, we engineered an improved version of the CaMKIIα reporter Camuiα with a larger response amplitude.

Indexed as

Cell TrackingFluorescence Resonance Energy TransferAmino Acid SequenceAmino Acid SubstitutionAnimalsCalcium-Calmodulin-Dependent Protein Kinase Type 2Cell LineGene ExpressionGenes, ReporterGreen Fluorescent ProteinsHumansLuminescent ProteinsProtein ConformationProtein EngineeringRecombinant Fusion ProteinsRed Fluorescent ProteinCalcium-Calmodulin-Dependent Protein Kinase Type 2Green Fluorescent ProteinsLuminescent ProteinsRecombinant Fusion ProteinsRed Fluorescent Protein

Identifiers

PMID26879144
PMCPMC4754705
OpenAlexW2301795778

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.