Evidence map›Paper›PMID 26878724›Full record

SynthesisNature genetics2016

NUDT15 polymorphisms alter thiopurine metabolism and hematopoietic toxicity.

Takaya Moriyama, Rina Nishii, Virginia Perez-Andreu, Wenjian Yang, Federico Antillon Klussmann, Xujie Zhao, Ting-Nien Lin, Keito Hoshitsuki, Jacob Nersting, Kentaro Kihira and 24 more

Registry-linked trialOpen access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00137111 (Total XV - Total Therapy Study XV for Newly Diagnosed Patients With Acute Lymphoblastic Leukemia), which is not on this map. Cited by 258 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
258citing papers in PubMed, 8 pooled it
47.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00137111 phase3completednot on this map

Total XV - Total Therapy Study XV for Newly Diagnosed Patients With Acute Lymphoblastic Leukemia

TypeinterventionalSponsorSt. Jude Children's Research HospitalRan2000 to 2014Enrolled501ConditionsLymphoblastic Leukemia, AcuteArmsPrednisone, Dexamethasone, Vincristine, Daunorubicin, Doxorubicin, L-asparaginase, PEG-L-asparaginase, Erwinia asparaginase, Methotrexate, Cyclophosphamide, Cytarabine, Etoposide, Mercaptopurine, Imatinib, chemotherapy, intrathecal chemotherapy
3 · Its place in the literature

Who cites it

258 citing papers in PubMed, 8 syntheses or guidelines pooled it, 461 citations in OpenAlex.

  1. Guideline
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  4. Association ofHaematologica · 2024
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198 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 15 institutions in 6 countries.

Takaya MoriyamaDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Rina NishiiDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Virginia Perez-AndreuDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Wenjian YangDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Federico Antillon KlussmannUnidad Nacional de Oncología Pediátrica, Guatemala City, Guatemala.
Xujie ZhaoDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.ORCID http://orcid.org/0000-0001-7213-2270
Ting-Nien LinDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Keito HoshitsukiDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Jacob NerstingDepartment of Paediatrics and Adolescent Medicine, University Hospital Rigshospitalet, Copenhagen, Denmark.
Kentaro KihiraDepartment of Pediatrics, Mie University Graduate School of Medicine, Mie, Japan.
Ute HofmannDr. Margarete Fischer-Bosch Institute of Clinical Pharmacology, Stuttgart, Germany.
Yoshihiro KomadaDepartment of Pediatrics, Mie University Graduate School of Medicine, Mie, Japan.
Motohiro KatoDepartment of Pediatric Hematology and Oncology Research, National Center for Child Health and Development, Tokyo, Japan.
Robert McCorkleDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Lie LiDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Katsuyoshi KohDepartment of Hematology/Oncology, Saitama Children's Medical Center, Saitama, Japan.
Cesar Rolando NajeraUnidad Nacional de Oncología Pediátrica, Guatemala City, Guatemala.
Shirley Kow-Yin KhamNational University Cancer Institute, National University Health System, Singapore.
Tomoya IsobeGraduate School of Medicine and Faculty of Medicine, The University of Tokyo, Tokyo, Japan.
Zhiwei ChenNational University Cancer Institute, National University Health System, Singapore.
Edwynn Kean-Hui ChiewNational University Cancer Institute, National University Health System, Singapore.
Deepa BhojwaniDepartment of Pediatrics, Children's Hospital of Los Angeles, Los Angeles, California, USA.
Cynthia JeffriesDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Yan LuDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Matthias SchwabDr. Margarete Fischer-Bosch Institute of Clinical Pharmacology, Stuttgart, Germany.
Hiroto InabaDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Ching-Hon PuiDepartment of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Mary V RellingDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Atsushi ManabeDepartment of Pediatrics, St. Luke's International Hospital, Tokyo, Japan.
Hiroki HoriDepartment of Pediatrics, Mie University Graduate School of Medicine, Mie, Japan.
Kjeld SchmiegelowDepartment of Paediatrics and Adolescent Medicine, University Hospital Rigshospitalet, Copenhagen, Denmark.
Allen E J YeohNational University Cancer Institute, National University Health System, Singapore.
William E EvansDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Jun J YangDepartment of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.ORCID http://orcid.org/0000-0002-0770-9659
St. Jude Children's Research Hospital · USMie University · JPNational University Cancer Institute, Singapore · SGChildren's Hospital of Los Angeles · USDr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology · DEGerman Cancer Research Center · DENational Center For Child Health and Development · JPNational University of Singapore · SGRigshospitalet · DKSaitama Children's Medical Center · JPSt. Luke's International Hospital · JPThe University of Tokyo · JPTokyo Medical and Dental University · JPUniversidad Francisco Marroquín · GTUniversity of Copenhagen · DK

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
CPML - Project 3: Genome-wide Studies of Adverse EffectsP50GM115279 · NIGMS · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI LOH, MIGNON LEE-CHEUN, RELLING, MARY V · 2015 to 2019
$15.1M
PROFESSIONAL ONCOLOGY EDUCATION PROGRAMR25CA023944 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SUZANNE A. GRONEMEYER · 1986 to 2026
$8.3M
NCI NIH HHS CA021765NCI NIH HHS CA23944NCI NIH HHS P30 CA021765NCI NIH HHS R25 CA023944NIGMS NIH HHS GM115279NIGMS NIH HHS P50 GM115279
6 · The paper itself

Abstract

Widely used as anticancer and immunosuppressive agents, thiopurines have narrow therapeutic indices owing to frequent toxicities, partly explained by TPMT genetic polymorphisms. Recent studies identified germline NUDT15 variation as another critical determinant of thiopurine intolerance, but the underlying molecular mechanisms and the clinical implications of this pharmacogenetic association remain unknown. In 270 children enrolled in clinical trials for acute lymphoblastic leukemia in Guatemala, Singapore and Japan, we identified four NUDT15 coding variants (p.Arg139Cys, p.Arg139His, p.Val18Ile and p.Val18_Val19insGlyVal) that resulted in 74.4-100% loss of nucleotide diphosphatase activity. Loss-of-function NUDT15 diplotypes were consistently associated with thiopurine intolerance across the three cohorts (P = 0.021, 2.1 × 10(-5) and 0.0054, respectively; meta-analysis P = 4.45 × 10(-8), allelic effect size = -11.5). Mechanistically, NUDT15 inactivated thiopurine metabolites and decreased thiopurine cytotoxicity in vitro, and patients with defective NUDT15 alleles showed excessive levels of thiopurine active metabolites and toxicity. Taken together, these results indicate that a comprehensive pharmacogenetic model integrating NUDT15 variants may inform personalized thiopurine therapy.

Indexed as

Antimetabolites, AntineoplasticGenetic Association StudiesHematopoiesisHumansMercaptopurineNudix HydrolasesPolymorphism, Single NucleotidePrecursor Cell Lymphoblastic Leukemia-LymphomaPyrophosphatasesAntimetabolites, AntineoplasticMercaptopurineNudix HydrolasesNUDT15 protein, humanPyrophosphatases

Identifiers

PMID26878724
PMCPMC5029084
OpenAlexW2275947820

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.