Evidence map›Paper›PMID 26877662›Full record

ArticleZooKeys2016

A common registration-to-publication automated pipeline for nomenclatural acts for higher plants (International Plant Names Index, IPNI), fungi (Index Fungorum, MycoBank) and animals (ZooBank).

Lyubomir Penev, Alan Paton, Nicola Nicolson, Paul Kirk, Richard L Pyle, Robert Whitton, Teodor Georgiev, Christine Barker, Christopher Hopkins, Vincent Robert and 2 more

Registry-linked trialAbstract read
In one paragraph

Article in ZooKeys, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06058845 (Efficacy of Tamarindus Indica Fruit Juice in Optimizing Cardiometabolic Health of Patients Living With HIV and Elevated Triglycerides), which is not on this map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06058845 nacompletednot on this mapstarted 2023, after this paper: background citation

Efficacy of Tamarindus Indica Fruit Juice in Optimizing Cardiometabolic Health of Patients Living With HIV and Elevated Triglycerides

TypeinterventionalSponsorKU LeuvenRan2023 to 2024Enrolled50ConditionsCardiometabolic Syndrome, Dyslipidemias, HypertensionArmsTamarindus indica fruit juice_A, Tamarindus indica fruit juice_B
3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. PNSS: An online plant name service system.Biodiversity data journal · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Lyubomir PenevInstitute for Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, Sofia, Bulgaria; Pensoft Publishers, Sofia, Bulgaria.
Alan PatonInternational Plant Name Index (IPNI) and Index Fungorum (IF), Royal Botanic Gardens Kew, UK.
Nicola NicolsonInternational Plant Name Index (IPNI) and Index Fungorum (IF), Royal Botanic Gardens Kew, UK.
Paul KirkInternational Plant Name Index (IPNI) and Index Fungorum (IF), Royal Botanic Gardens Kew, UK.
Richard L PyleZooBank, Bishop Museum, Honolulu, USA.
Robert WhittonZooBank, Bishop Museum, Honolulu, USA.
Teodor GeorgievPensoft Publishers, Sofia, Bulgaria.
Christine BarkerInternational Plant Name Index (IPNI) and Index Fungorum (IF), Royal Botanic Gardens Kew, UK.
Christopher HopkinsInternational Plant Name Index (IPNI) and Index Fungorum (IF), Royal Botanic Gardens Kew, UK.
Vincent RobertMycobank, CBS Fungal Biodiversity Centre, Utrecht, The Netherlands.
Jordan BiserkovPensoft Publishers, Sofia, Bulgaria.
Pavel StoevPensoft Publishers, Sofia, Bulgaria; National Museum of Natural History, Sofia, Bulgaria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Collaborative effort among four lead indexes of taxon names and nomenclatural acts (International Plant Name Index (IPNI), Index Fungorum, MycoBank and ZooBank) and the journals PhytoKeys, MycoKeys and ZooKeys to create an automated, pre-publication, registration workflow, based on a server-to-server, XML request/response model. The registration model for ZooBank uses the TaxPub schema, which is an extension to the Journal Tag Publishing Suite (JATS) of the National Library of Medicine (NLM). The indexing or registration model of IPNI and Index Fungorum will use the Taxonomic Concept Transfer Schema (TCS) as a basic standard for the workflow. Other journals and publishers who intend to implement automated, pre-publication, registration of taxon names and nomenclatural acts can also use the open sample XML formats and links to schemas and relevant information published in the paper.

Indexed as

Index FungorumInternational Plant Name Index (IPNI)Mycobanknomenclatural actspre-publication registrationTaxon namesZooBank

Identifiers

PMID26877662
PMCPMC4741224

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.