Evidence map›Paper›PMID 26877167›Full record

ArticleScientific reports2016

Strain-dependent profile of misfolded prion protein aggregates.

Rodrigo Morales, Ping Ping Hu, Claudia Duran-Aniotz, Fabio Moda, Rodrigo Diaz-Espinoza, Baian Chen, Javiera Bravo-Alegria, Natallia Makarava, Ilia V Baskakov, Claudio Soto

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 40 citations in OpenAlex.

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  10. Review
  11. Aggregation Condition-Structure Relationship of Mouse Prion Protein Fibrils.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Rodrigo MoralesMitchell Center for Alzheimer's disease and Related Brain Disorders, Dept. of Neurology, University of Texas Houston Medical School, Houston, TX 77030, USA.
Ping Ping HuMitchell Center for Alzheimer's disease and Related Brain Disorders, Dept. of Neurology, University of Texas Houston Medical School, Houston, TX 77030, USA.
Claudia Duran-AniotzMitchell Center for Alzheimer's disease and Related Brain Disorders, Dept. of Neurology, University of Texas Houston Medical School, Houston, TX 77030, USA.
Fabio ModaMitchell Center for Alzheimer's disease and Related Brain Disorders, Dept. of Neurology, University of Texas Houston Medical School, Houston, TX 77030, USA.
Rodrigo Diaz-EspinozaMitchell Center for Alzheimer's disease and Related Brain Disorders, Dept. of Neurology, University of Texas Houston Medical School, Houston, TX 77030, USA.
Baian ChenMitchell Center for Alzheimer's disease and Related Brain Disorders, Dept. of Neurology, University of Texas Houston Medical School, Houston, TX 77030, USA.
Javiera Bravo-AlegriaMitchell Center for Alzheimer's disease and Related Brain Disorders, Dept. of Neurology, University of Texas Houston Medical School, Houston, TX 77030, USA.
Natallia MakaravaBioMET and Department of Anatomy and Neurobiology, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Ilia V BaskakovBioMET and Department of Anatomy and Neurobiology, University of Maryland School of Medicine, Baltimore, Maryland, USA.
Claudio SotoMitchell Center for Alzheimer's disease and Related Brain Disorders, Dept. of Neurology, University of Texas Houston Medical School, Houston, TX 77030, USA.
The University of Texas Health Science Center at Houston · USUniversidad de Los Andes, Chile · CLUniversity of Maryland, Baltimore · USCapital Medical University · CNChongqing University · CN

Funding

Zoonotic potential of CWD and influence of environmental contamination on prion propagationP01AI077774 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI EDWARD Arthur HOOVER · 2008 to 2026
$36.1M
Self-Propagating Mechanism of Prion DiseasesR01NS045585 · NINDS · UNIVERSITY OF MD BIOTECHNOLOGY INSTITUTE · PI Ilia V Baskakov · 2003 to 2026
$9.6M
Cyclic Amplification of Prion Protein MisfoldingR01NS049173 · NINDS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI SOTO, CLAUDIO · 2005 to 2014
$3.2M
Absorption, Metabolism and Biodistribution of Prions after Oral IngestionR01NS078745 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SOTO, CLAUDIO · 2012 to 2016
$2.2M
NIAID NIH HHS P01 AI077774NINDS NIH HHS NS045585NINDS NIH HHS R01 NS045585NINDS NIH HHS R01 NS049173NINDS NIH HHS R01 NS078745
6 · The paper itself

Abstract

Prions are composed of the misfolded prion protein (PrP(Sc)) organized in a variety of aggregates. An important question in the prion field has been to determine the identity of functional PrP(Sc) aggregates. In this study, we used equilibrium sedimentation in sucrose density gradients to separate PrP(Sc) aggregates from three hamster prion strains (Hyper, Drowsy, SSLOW) subjected to minimal manipulations. We show that PrP(Sc) aggregates distribute in a wide range of arrangements and the relative proportion of each species depends on the prion strain. We observed a direct correlation between the density of the predominant PrP(Sc) aggregates and the incubation periods for the strains studied. The relative presence of PrP(Sc) in fractions of different sucrose densities was indicative of the protein deposits present in the brain as analyzed by histology. Interestingly, no association was found between sensitivity to proteolytic degradation and aggregation profiles. Therefore, the organization of PrP molecules in terms of the density of aggregates generated may determine some of the particular strain properties, whereas others are independent from it. Our findings may contribute to understand the mechanisms of strain variation and the role of PrP(Sc) aggregates in prion-induced neurodegeneration.

Indexed as

AnimalsBrainCentrifugation, Density GradientFemaleGene ExpressionMesocricetusPrion DiseasesProtein AggregatesProtein Aggregation, PathologicalProtein ConformationProtein FoldingProteolysisPrPSc ProteinsSpecies SpecificityProtein AggregatesPrPSc Proteins

Identifiers

PMID26877167
PMCPMC4753423
OpenAlexW2395421773

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.