Evidence map›Paper›PMID 26876947›Full record

ArticleBiological psychiatry2016

Pharmacogenomic Study of Clozapine-Induced Agranulocytosis/Granulocytopenia in a Japanese Population.

Takeo Saito, Masashi Ikeda, Taisei Mushiroda, Takeshi Ozeki, Kenji Kondo, Ayu Shimasaki, Kohei Kawase, Shuji Hashimoto, Hidenaga Yamamori, Yuka Yasuda and 27 more

Open access · hybridAbstract read
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In one paragraph

Article in Biological psychiatry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 2 pooled it
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 2 syntheses or guidelines pooled it, 73 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  6. Article
  7. Article
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  10. Article
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  12. Review
  13. HLA-associated adverse drug reactions - scoping review.Clinical and translational science · 2021
    Article
  14. Article
  15. Genetic Testing for Antipsychotic Pharmacotherapy: Bench to Bedside.Behavioral sciences (Basel, Switzerland) · 2021
    Review
  16. Progress in study on the association between HLA genetic variation and adverse drug reactions.Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2021
    Article
  17. Article
  18. Article
  19. Omics era in forensic medicine: towards a new ageTurkish journal of medical sciences · 2020
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

37 authors at 18 institutions in 3 countries.

Takeo SaitoDepartment of Psychiatry, Fujita Health University School of Medicine, Toyoake, Aichi.
Masashi IkedaDepartment of Psychiatry, Fujita Health University School of Medicine, Toyoake, Aichi.
Taisei MushirodaResearch Group for Pharmacogenomics, RIKEN Center for Integrative Medical Sciences, Yokohama.
Takeshi OzekiResearch Group for Pharmacogenomics, RIKEN Center for Integrative Medical Sciences, Yokohama.
Kenji KondoDepartment of Psychiatry, Fujita Health University School of Medicine, Toyoake, Aichi.
Ayu ShimasakiDepartment of Psychiatry, Fujita Health University School of Medicine, Toyoake, Aichi.
Kohei KawaseDepartment of Psychiatry, Fujita Health University School of Medicine, Toyoake, Aichi.
Shuji HashimotoDepartment of Hygiene, Fujita Health University School of Medicine, Toyoake, Aichi.
Hidenaga YamamoriDepartment of Psychiatry, Osaka University Graduate School of Medicine, Suita, Osaka.
Yuka YasudaDepartment of Psychiatry, Osaka University Graduate School of Medicine, Suita, Osaka.
Michiko FujimotoDepartment of Psychiatry, Osaka University Graduate School of Medicine, Suita, Osaka.
Kazutaka OhiDepartment of Psychiatry, Osaka University Graduate School of Medicine, Suita, Osaka.
Masatoshi TakedaDepartment of Psychiatry, Osaka University Graduate School of Medicine, Suita, Osaka; Molecular Research Center for Children's Mental Development, United Graduate School of Child Development, Osaka University, Suita, Osaka.
Yoichiro KamataniLaboratory for Statistical Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama.
Shusuke NumataDepartment of Psychiatry, Institute of Biomedical Sciences, Tokushima University Graduate School, Tokushima.
Tetsuro OhmoriDepartment of Psychiatry, Institute of Biomedical Sciences, Tokushima University Graduate School, Tokushima.
Shu-Ichi UenoDepartment of Neuropsychiatry, Ehime University Graduate School of Medicine, Shitsukawa.
Manabu MakinodanDepartment of Psychiatry, Faculty of Medicine, Nara Medical University, Kashihara, Nara.
Yosuke NishihataDepartment of Psychiatry, Faculty of Medicine, Nara Medical University, Kashihara, Nara.
Masaharu KubotaKusakabe Memorial Hospital, Yamanasi, Yamanasi; RIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
Takemi KimuraDivision of Clinical Research, National Hospital Organization Kikuchi Hospital, Koshi, Kumamoto.
Nobuhisa KanaharaChiba University Center for Forensic Mental Health, Chiba, Chiba.
Naoki HashimotoDepartment of Psychiatry, Hokkaido University Graduate School of Medicine, Sapporo, Hokkaido.
Kiyoshi FujitaDepartment of Psychiatry, Okehazama Hospital, Toyoake, Aichi.
Kiyotaka NemotoDepartment of Psychiatry, Division of Clinical Medicine, Faculty of Medicine, University of Tsukuba, Tsukuba, Ibaraki.
Taku FukaoDepartment of Psychiatry, Gifu University Graduate School of Medicine, Gifu.
Taro SuwaDepartment of Psychiatry, Graduate School of Medicine, Kyoto University, Sakyo-ku, Kyoto.
Tetsuro NodaOsaka Psychiatric Medical Center, Hirakata, Osaka.
Yuji YadaOkayama Psychiatric Medical Center, Kita-ku, Okayama.
Manabu TakakiDepartment of Neuropsychiatry, Okayama University Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Okayama City, Okayama.
Naoya KidaNational Hospital Organization Ryukyu Hospital, Kunigami-gun, Okinawa.
Taku OtsuruNational Hospital Organization Ryukyu Hospital, Kunigami-gun, Okinawa.
Masaru MurakamiNational Hospital Organization Ryukyu Hospital, Kunigami-gun, Okinawa.
Atsushi TakahashiLaboratory for Statistical Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama; Laboratory for Omics Informatics, Omics Research Center, National Cerebral and Cardiovascular Center, Osaka.
Michiaki KuboRIKEN Center for Integrative Medical Sciences, Yokohama, Japan.
Ryota HashimotoDepartment of Psychiatry, Osaka University Graduate School of Medicine, Suita, Osaka; Molecular Research Center for Children's Mental Development, United Graduate School of Child Development, Osaka University, Suita, Osaka. Electronic address: hashimor@psy.med.osaka-u.ac.jp.
Nakao IwataDepartment of Psychiatry, Fujita Health University School of Medicine, Toyoake, Aichi.
Fujita Health University · JPNational Hospital Organization · JPRIKEN Center for Integrative Medical Sciences · JPThe University of Osaka · JPCenter for Children · USNara Medical University · JPTokushima University · JPCenter for Forensic Mental Health, Chiba University · JPEhime University · JPGifu University · JPHokkaido University · JPKyoto University · JPNational Cerebral and Cardiovascular Center · JPOkayama Psychiatric Medical Center · JPOkayama University · JPPsychiatric Medical Center · AMUniversity of Tsukuba · JPUniversity of Yamanashi Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundClozapine-induced agranulocytosis (CIA)/clozapine-induced granulocytopenia (CIG) (CIAG) is a life-threatening event for schizophrenic subjects treated with clozapine.

methodsTo examine the genetic factor for CIAG, a genome-wide pharmacogenomic analysis was conducted using 50 subjects with CIAG and 2905 control subjects.

resultsWe identified a significant association in the human leukocyte antigen (HLA) region (rs1800625, p = 3.46 × 10(-9), odds ratio [OR] = 3.8); therefore, subsequent HLA typing was performed. We detected a significant association of HLA-B*59:01 with CIAG (p = 3.81 × 10(-8), OR = 10.7) and confirmed this association by comparing with an independent clozapine-tolerant control group (n = 380, p = 2.97 × 10(-5), OR = 6.3). As we observed that the OR of CIA (OR: 9.3~15.8) was approximately double that in CIG (OR: 4.4~7.4), we hypothesized that the CIG subjects were a mixed population of those who potentially would develop CIA and those who would not develop CIA (non-CIA). This hypothesis allowed the proportion of the CIG who were non-CIA to be calculated, enabling us to estimate the positive predictive value of the nonrisk allele on non-CIA in CIG subjects. Assuming this model, we estimated that 1) ~50% of CIG subjects would be non-CIA; and 2) ~60% of the CIG subjects without the risk allele would be non-CIA and therefore not expected to develop CIA.

conclusionsOur results suggest that HLA-B*59:01 is a risk factor for CIAG in the Japanese population. Furthermore, if our model is true, the results suggest that rechallenging certain CIG subjects with clozapine may not be always contraindicated.

Indexed as

Pharmacogenomic TestingAdultAgranulocytosisAllelesAsian PeopleCase-Control StudiesClozapineFemaleGenetic Predisposition to DiseaseGenotypeHistocompatibility TestingHLA-B AntigensHumansMaleRisk FactorsSensitivity and SpecificityClozapineHLA-B59 antigenHLA-B AntigensGenome-wide association studyHuman leukocyte antigenPharmacogenomicsSchizophreniaSide effectSingle nucleotide polymorphism

Identifiers

PMID26876947
OpenAlexW2268706061

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.