Evidence map›Paper›PMID 26876181›Full record

ArticleCell reports2016

The Apoptotic Engulfment Machinery Regulates Axonal Degeneration in C. elegans Neurons.

Annika L A Nichols, Ellen Meelkop, Casey Linton, Rosina Giordano-Santini, Robert K Sullivan, Alessandra Donato, Cara Nolan, David H Hall, Ding Xue, Brent Neumann and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. bioRxiv : the preprint server for biology · 2025
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  6. Article
  7. The role of secreted proteins in efferocytosis.Frontiers in cell and developmental biology · 2023
    Review
  8. Exposome, Molecular Pathways and One Health: The InvertebrateInternational journal of molecular sciences · 2022
    Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Review
  14. Effects of NADBiomolecules · 2020
    Review
  15. Article
  16. Article
  17. A Microfluidic Culture Platform to Assess Axon Degeneration.Methods in molecular biology (Clifton, N.J.) · 2020
    Article
  18. Mechanisms of injury-induced axon degeneration.Current opinion in neurobiology · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Annika L A NicholsClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
Ellen MeelkopClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
Casey LintonClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
Rosina Giordano-SantiniClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
Robert K SullivanClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
Alessandra DonatoClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
Cara NolanClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
David H HallCenter for C. elegans Anatomy, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Ding XueDepartment of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, CO 80309, USA.
Brent NeumannClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia. Electronic address: brent.neumann@monash.edu.
Massimo A HilliardClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia. Electronic address: m.hilliard@uq.edu.au.
Park Centre for Mental Health · AUUniversity of Queensland · AUAlbert Einstein College of Medicine · USUniversity of Colorado Boulder · US

Funding

Center for C elegans AnatomyR24OD010943 · OD · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI DAVID H. HALL, Nathan Schroeder · 2012 to 2026
$9.6M
CENTER FOR CAENORHABDITIS ELGANS ANATOMYR24RR012596 · NCRR · YESHIVA UNIVERSITY · PI HALL, DAVID H. · 1998 to 2011
$8.0M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Femtosecond laser axotomy for in vivo nerve regeneration studies in C elegansR01NS060129 · NINDS · UNIVERSITY OF TEXAS AT AUSTIN · PI BEN-YAKAR, ADELA · 2007 to 2010
$1.7M
NCRR NIH HHS R24 RR012596NIH HHS OD 010943NIH HHS P40 OD010440NIH HHS R24 OD010943NINDS NIH HHS R01 NS060129
6 · The paper itself

Abstract

Axonal degeneration is a characteristic feature of neurodegenerative disease and nerve injury. Here, we characterize axonal degeneration in Caenorhabditis elegans neurons following laser-induced axotomy. We show that this process proceeds independently of the WLD(S) and Nmnat pathway and requires the axonal clearance machinery that includes the conserved transmembrane receptor CED-1/Draper, the adaptor protein CED-6, the guanine nucleotide exchange factor complex Crk/Mbc/dCed-12 (CED-2/CED-5/CED-12), and the small GTPase Rac1 (CED-10). We demonstrate that CED-1 and CED-6 function non-cell autonomously in the surrounding hypodermis, which we show acts as the engulfing tissue for the severed axon. Moreover, we establish a function in this process for CED-7, an ATP-binding cassette (ABC) transporter, and NRF-5, a lipid-binding protein, both associated with release of lipid-vesicles during apoptotic cell clearance. Thus, our results reveal the existence of a WLD(S)/Nmnat-independent axonal degeneration pathway, conservation of the axonal clearance machinery, and a function for CED-7 and NRF-5 in this process.

Indexed as

AnimalsApoptosisApoptosis Regulatory ProteinsATP-Binding Cassette TransportersAxotomyCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsCytoskeletal ProteinsEpidermal CellsEpidermisGene Expression RegulationMembrane ProteinsNerve DegenerationNeuronsPhosphoproteinsApoptosis Regulatory ProteinsATP-Binding Cassette TransportersCaenorhabditis elegans ProteinsCarrier ProteinsCED-10 protein, C elegansCED-12 protein, C elegansced-1 protein, C elegansCED-5 protein, C elegansCED-6 protein, C elegansCED-7 protein, C elegansCytoskeletal ProteinsMembrane ProteinsNRF-5 protein, C elegansPhosphoproteinsProto-Oncogene Proteins c-crkrac GTP-Binding Proteins

Identifiers

PMID26876181
PMCPMC4821572
OpenAlexW2265436810

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.