Evidence map›Paper›PMID 26876023›Full record

ArticleNature communications2016

GAME9 regulates the biosynthesis of steroidal alkaloids and upstream isoprenoids in the plant mevalonate pathway.

Pablo D Cárdenas, Prashant D Sonawane, Jacob Pollier, Robin Vanden Bossche, Veena Dewangan, Efrat Weithorn, Lior Tal, Sagit Meir, Ilana Rogachev, Sergey Malitsky and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 151 papers.

0numbers the graph read from it
0cells of the map it votes in
151citing papers in PubMed
36.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

151 citing papers in PubMed, 331 citations in OpenAlex.

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  15. Molecular breeding of tomato: Advances and challenges.Journal of integrative plant biology · 2025
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91 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 3 countries.

Pablo D CárdenasDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Prashant D SonawaneDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Jacob PollierDepartment of Plant Systems Biology, Flanders Institute for Biotechnology (VIB), Gent B-9052, Belgium.ORCID http://orcid.org/0000-0002-1134-9238
Robin Vanden BosscheDepartment of Plant Systems Biology, Flanders Institute for Biotechnology (VIB), Gent B-9052, Belgium.
Veena DewanganPlant Molecular Biology Unit, Division of Biochemical Sciences, Council of Scientific and Industrial Research-National Chemical Laboratory, Pune 411008, India.
Efrat WeithornDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Lior TalDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Sagit MeirDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Ilana RogachevDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Sergey MalitskyDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Ashok P GiriPlant Molecular Biology Unit, Division of Biochemical Sciences, Council of Scientific and Industrial Research-National Chemical Laboratory, Pune 411008, India.
Alain GoossensDepartment of Plant Systems Biology, Flanders Institute for Biotechnology (VIB), Gent B-9052, Belgium.ORCID http://orcid.org/0000-0002-1599-551X
Saul BurdmanDepartment of Plant Pathology and Microbiology, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot 76100, Israel.
Asaph AharoniDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot 7610001, Israel.
Weizmann Institute of Science · ILVlaams Instituut voor Biotechnologie · BEHebrew University of Jerusalem · ILNational Chemical Laboratory · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Steroidal glycoalkaloids (SGAs) are cholesterol-derived molecules produced by solanaceous species. They contribute to pathogen defence but are toxic to humans and considered as anti-nutritional compounds. Here we show that GLYCOALKALOID METABOLISM 9 (GAME9), an APETALA2/Ethylene Response Factor, related to regulators of alkaloid production in tobacco and Catharanthus roseus, controls SGA biosynthesis. GAME9 knockdown and overexpression in tomato and potato alters expression of SGAs and upstream mevalonate pathway genes including the cholesterol biosynthesis gene STEROL SIDE CHAIN REDUCTASE 2 (SSR2). Levels of SGAs, C24-alkylsterols and the upstream mevalonate and cholesterol pathways intermediates are modified in these plants. Δ(7)-STEROL-C5(6)-DESATURASE (C5-SD) in the hitherto unresolved cholesterol pathway is a direct target of GAME9. Transactivation and promoter-binding assays show that GAME9 exerts its activity either directly or cooperatively with the SlMYC2 transcription factor as in the case of the C5-SD gene promoter. Our findings provide insight into the regulation of SGA biosynthesis and means for manipulating these metabolites in crops.

Indexed as

Gene Expression Regulation, PlantAlkaloidsCholesterolGene Knockdown TechniquesGlucoseIn Situ HybridizationMevalonic AcidOxidoreductasesOxidoreductases Acting on CH-CH Group DonorsPlant ProteinsReal-Time Polymerase Chain ReactionRNA, MessengerSolanum lycopersicumSolanum tuberosumTerpenesTranscription FactorsAlkaloidsCholesterolGlucoseMevalonic AcidOxidoreductasesOxidoreductases Acting on CH-CH Group DonorsPlant ProteinsRNA, MessengerTerpenesTranscription Factors

Identifiers

PMID26876023
PMCPMC4756317
OpenAlexW2285514562

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.