Evidence map›Paper›PMID 26873976›Full record

ArticleJournal of experimental botany2016

Natural variation in rosette size under salt stress conditions corresponds to developmental differences between Arabidopsis accessions and allelic variation in the LRR-KISS gene.

Magdalena M Julkowska, Karlijn Klei, Like Fokkens, Michel A Haring, M Eric Schranz, Christa Testerink

Abstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed.

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  18. PcWRKY11, an II-d WRKY Transcription Factor fromInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Magdalena M JulkowskaPlant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Postbus 94215, 1090GE Amsterdam, the Netherlands.
Karlijn KleiPlant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Postbus 94215, 1090GE Amsterdam, the Netherlands.
Like FokkensDepartment of Phytopathology, University of Amsterdam, Postbus 94215, 1090GE Amsterdam, the Netherlands.
Michel A HaringPlant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Postbus 94215, 1090GE Amsterdam, the Netherlands.
M Eric SchranzBiosystematics Group, Wageningen University and Research Centre, Wageningen, the Netherlands.
Christa TesterinkPlant Physiology, Swammerdam Institute for Life Sciences, University of Amsterdam, Postbus 94215, 1090GE Amsterdam, the Netherlands c.s.testerink@uva.nl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Natural variation among Arabidopsis accessions is an important genetic resource to identify mechanisms underlying plant development and stress tolerance. To evaluate the natural variation in salinity stress tolerance, two large-scale experiments were performed on two populations consisting of 160 Arabidopsis accessions each. Multiple traits, including projected rosette area, and fresh and dry weight were collected as an estimate for salinity tolerance. Our results reveal a correlation between rosette size under salt stress conditions and developmental differences between the accessions grown in control conditions, suggesting that in general larger plants were more salt tolerant. This correlation was less pronounced when plants were grown under severe salt stress conditions. Subsequent genome wide association study (GWAS) revealed associations with novel candidate genes for salinity tolerance such as LRR-KISS (At4g08850),flowering locus KH-domain containing protein and a DUF1639-containing protein Accessions with high LRR-KISS expression developed larger rosettes under salt stress conditions. Further characterization of allelic variation in candidate genes identified in this study will provide more insight into mechanisms of salt stress tolerance due to enhanced shoot growth.

Indexed as

AllelesEcotypeGenetic VariationArabidopsisArabidopsis ProteinsGenes, PlantGenome-Wide Association StudyInheritance PatternsMultigene FamilyPhenotypePlant LeavesProtein Serine-Threonine KinasesReceptors, Cell SurfaceSalt ToleranceSodium ChlorideStress, PhysiologicalArabidopsis ProteinsMDIS2 protein, ArabidopsisProtein Serine-Threonine KinasesReceptors, Cell SurfaceSodium ChlorideArabidopsisdevelopmentGWASnatural variationrosette sizesalt stress.

Identifiers

PMID26873976
PMCPMC4809279

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.