Evidence map›Paper›PMID 26873922›Full record

ArticleNucleic acids research2016

Small activating RNA binds to the genomic target site in a seed-region-dependent manner.

Xing Meng, Qian Jiang, Nannan Chang, Xiaoxia Wang, Chujun Liu, Jingwei Xiong, Huiqing Cao, Zicai Liang

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 58 citations in OpenAlex.

  1. RNA therapeutics: current status and future directions.Signal transduction and targeted therapy · 2026
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  7. Review
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  10. The roles of subcellular Argonaute 2 in cardiovascular diseases.Journal of translational internal medicine · 2025
    Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Oligonucleotide therapies for nonalcoholic steatohepatitis.Molecular therapy. Nucleic acids · 2024
    Review
  16. Article
  17. Assembling the RNA therapeutics toolbox.Medical review (2021) · 2024
    Review
  18. Article
  19. Review
  20. RNA activation in ticks.Scientific reports · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Xing MengInstitute of Molecular Medicine, Peking University, Beijing 100871, PR China.
Qian JiangInstitute of Molecular Medicine, Peking University, Beijing 100871, PR China.
Nannan ChangInstitute of Molecular Medicine, Peking University, Beijing 100871, PR China.
Xiaoxia WangInstitute of Molecular Medicine, Peking University, Beijing 100871, PR China.
Chujun LiuInstitute of Molecular Medicine, Peking University, Beijing 100871, PR China.
Jingwei XiongInstitute of Molecular Medicine, Peking University, Beijing 100871, PR China.
Huiqing CaoInstitute of Molecular Medicine, Peking University, Beijing 100871, PR China caohuiqing@pku.edu.cn.
Zicai LiangInstitute of Molecular Medicine, Peking University, Beijing 100871, PR China Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin 300072, PR China liangz@pku.edu.cn.
Peking University · CNCollaborative Innovation Center of Chemical Science and Engineering Tianjin · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA activation (RNAa) is the upregulation of gene expression by small activating RNAs (saRNAs). In order to investigate the mechanism by which saRNAs act in RNAa, we used the progesterone receptor (PR) gene as a model, established a panel of effective saRNAs and assessed the involvement of the sense and antisense strands of saRNA in RNAa. All active saRNAs had their antisense strand effectively incorporated into Ago2, whereas such consistency did not occur for the sense strand. Using a distal hotspot for saRNA targeting at 1.6-kb upstream from the PR transcription start site, we further established that gene activation mediated by saRNA depended on the complementarity of the 5' region of the antisense strand, and that such activity was largely abolished by mutations in this region of the saRNA. We found markedly reduced RNAa effects when we created mutations in the genomic target site of saRNA PR-1611, thus providing evidence that RNAa depends on the integrity of the DNA target. We further demonstrated that this saRNA bound the target site on promoter DNA. These results demonstrated that saRNAs work via an on-site mechanism by binding to target genomic DNA in a seed-region-dependent manner, reminiscent of miRNA-like target recognition.

Indexed as

Gene Expression RegulationArgonaute ProteinsBase PairingBase SequenceBinding SitesChromatinCRISPR-Cas SystemsDNAGenes, ReporterHEK293 CellsHumansLuciferasesMCF-7 CellsMolecular Sequence DataMutationPromoter Regions, GeneticAGO2 protein, humanArgonaute ProteinsChromatinDNALuciferasesReceptors, ProgesteroneRNA, Small Untranslated

Identifiers

PMID26873922
PMCPMC4797303
OpenAlexW2265533369

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.