Evidence map›Paper›PMID 26872060›Full record

ArticleOncotarget2016

Construction and analysis of cardiac hypertrophy-associated lncRNA-mRNA network based on competitive endogenous RNA reveal functional lncRNAs in cardiac hypertrophy.

Chao Song, Jian Zhang, Yan Liu, Hao Pan, Han-Ping Qi, Yong-Gang Cao, Jian-Mei Zhao, Shang Li, Jing Guo, Hong-Li Sun and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed, 105 citations in OpenAlex.

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6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Chao SongDepartment of Pharmacology, Harbin Medical University-Daqing, Daqing, China.
Jian ZhangDepartment of Medical Informatics, Harbin Medical University-Daqing, Daqing, China.
Yan LiuDepartment of Pharmacology, Harbin Medical University-Daqing, Daqing, China.
Hao PanDepartment of Pharmacology, Harbin Medical University-Daqing, Daqing, China.
Han-Ping QiDepartment of Pharmacology, Harbin Medical University-Daqing, Daqing, China.
Yong-Gang CaoDepartment of Pharmacology, Harbin Medical University-Daqing, Daqing, China.
Jian-Mei ZhaoDepartment of Medical Informatics, Harbin Medical University-Daqing, Daqing, China.
Shang LiDepartment of Medical Informatics, Harbin Medical University-Daqing, Daqing, China.
Jing GuoDepartment of Pharmacology, Harbin Medical University-Daqing, Daqing, China.
Hong-Li SunDepartment of Pharmacology, Harbin Medical University-Daqing, Daqing, China.
Chun-Quan LiDepartment of Medical Informatics, Harbin Medical University-Daqing, Daqing, China.
Harbin Medical University · CNDaqing City People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cardiac hypertrophy (CH) could increase cardiac after-load and lead to heart failure. Recent studies have suggested that long non-coding RNA (lncRNA) played a crucial role in the process of the cardiac hypertrophy, such as Mhrt, TERMINATOR. Some studies have further found a new interacting mechanism, competitive endogenous RNA (ceRNA), of which lncRNA could interact with micro-RNAs (miRNA) and indirectly interact with mRNAs through competing interactions. However, the mechanism of ceRNA regulated by lncRNA in the CH remained unclear. In our study, we generated a global triple network containing mRNA, miRNA and lncRNA, and extracted a CH related lncRNA-mRNA network (CHLMN) through integrating the data from starbase, miRanda database and gene expression profile. Based on the ceRNA mechanism, we analyzed the characters of CHLMN and found that 3 lncRNAs (SLC26A4-AS1, RP11-344E13.3 and MAGI1-IT1) were high related to CH. We further performed cluster module analysis and random walk with restart for the CHLMN, finally 14 lncRNAs had been discovered as the potential CH related disease genes. Our results showed that lncRNA played an important role in the CH and could shed new light to the understanding underlying mechanisms of the CH.

Indexed as

CardiomegalyGene Expression ProfilingGene Regulatory NetworksHumansModels, GeneticRNA, Long NoncodingRNA, MessengerRNA, Long NoncodingRNA, Messengercardiac hypertrophyceRNAgene expression profilelncRNAnetwork analysisPathology Section

Identifiers

PMID26872060
PMCPMC4905442
OpenAlexW2259477902

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.