Evidence map›Paper›PMID 26872042›Full record

ArticleThe ISME journal2016

Novel microbial assemblages inhabiting crustal fluids within mid-ocean ridge flank subsurface basalt.

Sean P Jungbluth, Robert M Bowers, Huei-Ting Lin, James P Cowen, Michael S Rappé

Abstract read
In one paragraph

Article in The ISME journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sean P JungbluthHawaii Institute of Marine Biology, SOEST, University of Hawaii, Kaneohe, HI, USA.ORCID 0000-0001-9265-8341
Robert M BowersNASA Astrobiology Institute, IfA, University of Hawaii, Honolulu, HI, USA.
Huei-Ting LinDepartment of Oceanography, SOEST, University of Hawaii, Honolulu, HI, USA.
James P CowenDepartment of Oceanography, SOEST, University of Hawaii, Honolulu, HI, USA.
Michael S RappéHawaii Institute of Marine Biology, SOEST, University of Hawaii, Kaneohe, HI, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although little is known regarding microbial life within our planet's rock-hosted deep subseafloor biosphere, boreholes drilled through deep ocean sediment and into the underlying basaltic crust provide invaluable windows of access that have been used previously to document the presence of microorganisms within fluids percolating through the deep ocean crust. In this study, the analysis of 1.7 million small subunit ribosomal RNA genes amplified and sequenced from marine sediment, bottom seawater and basalt-hosted deep subseafloor fluids that span multiple years and locations on the Juan de Fuca Ridge flank was used to quantitatively delineate a subseafloor microbiome comprised of distinct bacteria and archaea. Hot, anoxic crustal fluids tapped by newly installed seafloor sampling observatories at boreholes U1362A and U1362B contained abundant bacterial lineages of phylogenetically unique Nitrospirae, Aminicenantes, Calescamantes and Chloroflexi. Although less abundant, the domain Archaea was dominated by unique, uncultivated lineages of marine benthic group E, the Terrestrial Hot Spring Crenarchaeotic Group, the Bathyarchaeota and relatives of cultivated, sulfate-reducing Archaeoglobi. Consistent with recent geochemical measurements and bioenergetic predictions, the potential importance of methane cycling and sulfate reduction were imprinted within the basalt-hosted deep subseafloor crustal fluid microbial community. This unique window of access to the deep ocean subsurface basement reveals a microbial landscape that exhibits previously undetected spatial heterogeneity.

Indexed as

ArchaeaBacteriaBiodiversityGeologic SedimentsMethaneOceans and SeasPhylogenyRNA, Ribosomal, 16SSeawaterSequence Analysis, DNASilicatesbasaltMethaneRNA, Ribosomal, 16SSilicates

Identifiers

PMID26872042
PMCPMC5029167

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.