Evidence map›Paper›PMID 26870070›Full record

ArticleFrontiers in plant science2016

BdCESA7, BdCESA8, and BdPMT Utility Promoter Constructs for Targeted Expression to Secondary Cell-Wall-Forming Cells of Grasses.

Deborah L Petrik, Cynthia L Cass, Dharshana Padmakshan, Cliff E Foster, John P Vogel, Steven D Karlen, John Ralph, John C Sedbrook

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Functional Analysis of Cellulose SynthaseFrontiers in plant science · 2018
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Deborah L PetrikSchool of Biological Sciences, Illinois State University, NormalIL, USA; U.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, MadisonWI, USA.
Cynthia L CassSchool of Biological Sciences, Illinois State University, NormalIL, USA; U.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, MadisonWI, USA.
Dharshana PadmakshanU.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison WI, USA.
Cliff E FosterU.S. Department of Energy Great Lakes Bioenergy Research Center, Michigan State University, East Lansing MI, USA.
John P VogelU.S. Department of Energy Joint Genome Institute, Walnut Creek CA, USA.
Steven D KarlenU.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison WI, USA.
John RalphU.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, MadisonWI, USA; Department of Biochemistry, Wisconsin Energy Institute, University of Wisconsin-Madison, MadisonWI, USA.
John C SedbrookSchool of Biological Sciences, Illinois State University, NormalIL, USA; U.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, MadisonWI, USA.
University of Wisconsin–Madison · USGreat Lakes Bioenergy Research Center · USIllinois State University · USJoint Genome Institute · USMichigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Utility vectors with promoters that confer desired spatial and temporal expression patterns are useful tools for studying gene and cellular function and for industrial applications. To target the expression of DNA sequences of interest to cells forming plant secondary cell walls, which generate most of the vegetative biomass, upstream regulatory sequences of the Brachypodium distachyon lignin biosynthetic gene BdPMT and the cellulose synthase genes BdCESA7 and BdCESA8 were isolated and cloned into binary vectors designed for Agrobacterium-mediated transformation of monocots. Expression patterns were assessed using the β-glucuronidase gene GUSPlus and X-glucuronide staining. All three promoters showed strong expression levels in stem tissue at the base of internodes where cell wall deposition is most active, in both vascular bundle xylem vessels and tracheids, and in interfascicular tissues, with expression less pronounced in developmentally older tissues. In leaves, BdCESA7 and BdCESA8 promoter-driven expression was strongest in leaf veins, leaf margins, and trichomes; relatively weaker and patchy expression was observed in the epidermis. BdPMT promoter-driven expression was similar to the BdCESA promoters expression patterns, including strong expression in trichomes. The intensity and extent of GUS staining varied considerably between transgenic lines, suggesting that positional effects influenced promoter activity. Introducing the BdPMT and BdCESA8 Open Reading Frames into BdPMT and BdCESA8 utility promoter binary vectors, respectively, and transforming those constructs into Brachypodium pmt and cesa8 loss-of-function mutants resulted in rescue of the corresponding mutant phenotypes. This work therefore validates the functionality of these utility promoter binary vectors for use in Brachypodium and likely other grass species. The identification, in Bdcesa8-1 T-DNA mutant stems, of an 80% reduction in crystalline cellulose levels confirms that the BdCESA8 gene is a secondary-cell-wall-forming cellulose synthase.

Indexed as

binary vectorsBrachypodiumcelluloseligninmonocotp-coumaratetissue-specific expression

Identifiers

PMID26870070
PMCPMC4740387
OpenAlexW2269042881

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.