Evidence map›Paper›PMID 26869621›Full record

ArticleG3 (Bethesda, Md.)2016

Whole Genome Comparison Reveals High Levels of Inbreeding and Strain Redundancy Across the Spectrum of Commercial Wine Strains of Saccharomyces cerevisiae.

Anthony R Borneman, Angus H Forgan, Radka Kolouchova, James A Fraser, Simon A Schmidt

Erratum issuedAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Exploring the Influence of DifferentFoods (Basel, Switzerland) · 2025
    Article
  8. Article
  9. Cytosolic PeroxiredoxinJournal of agricultural and food chemistry · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. JLOH: Inferring loss of heterozygosity blocks from sequencing data.Computational and structural biotechnology journal · 2023
    Article
  20. Phylogenomics of aiScience · 2022
    Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Anthony R BornemanThe Australian Wine Research Institute, PO Box 197, Glen Osmond, South Australia 5064, Australia Department of Genetics and Evolution, University of Adelaide, South Australia 5000, Australia anthony.borneman@awri.com.au.
Angus H ForganThe Australian Wine Research Institute, PO Box 197, Glen Osmond, South Australia 5064, Australia.
Radka KolouchovaThe Australian Wine Research Institute, PO Box 197, Glen Osmond, South Australia 5064, Australia.
James A FraserAustralian Infectious Diseases Research Centre and School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland 4072, Australia.
Simon A SchmidtThe Australian Wine Research Institute, PO Box 197, Glen Osmond, South Australia 5064, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Humans have been consuming wines for more than 7000 yr . For most of this time, fermentations were presumably performed by strains of Saccharomyces cerevisiae that naturally found their way into the fermenting must . In contrast, most commercial wines are now produced by inoculation with pure yeast monocultures, ensuring consistent, reliable and reproducible fermentations, and there are now hundreds of these yeast starter cultures commercially available. In order to thoroughly investigate the genetic diversity that has been captured by over 50 yr of commercial wine yeast development and domestication, whole genome sequencing has been performed on 212 strains of S. cerevisiae, including 119 commercial wine and brewing starter strains, and wine isolates from across seven decades. Comparative genomic analysis indicates that, despite their large numbers, commercial strains, and wine strains in general, are extremely similar genetically, possessing all of the hallmarks of a population bottle-neck, and high levels of inbreeding. In addition, many commercial strains from multiple suppliers are nearly genetically identical, suggesting that the limits of effective genetic variation within this genetically narrow group may be approaching saturation.

Indexed as

Comparative Genomic HybridizationGenome, FungalChromosomes, FungalCluster AnalysisDNA Copy Number VariationsDNA, FungalGenetic VariationHeterozygotePhylogenySaccharomyces cerevisiaeSequence Analysis, DNAWineDNA, Fungalcomparative genomicsfermentationgenome sequencingindustrial yeast

Identifiers

PMID26869621
PMCPMC4825664

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.